Agrobacterium sp. 33MFTa1.1: EYD00_00405
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Entry
EYD00_00405 CDS
T05906
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00061
Fatty acid biosynthesis
agt00071
Fatty acid degradation
agt01100
Metabolic pathways
agt01212
Fatty acid metabolism
agt02024
Quorum sensing
agt04146
Peroxisome
Module
agt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EYD00_00405
00071 Fatty acid degradation
EYD00_00405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EYD00_00405
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYD00_00405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
agt01004
]
EYD00_00405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agt04147
]
EYD00_00405
Enzymes [BR:
agt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EYD00_00405
Lipid biosynthesis proteins [BR:
agt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EYD00_00405
Exosome [BR:
agt04147
]
Exosomal proteins
Exosomal proteins of breast milk
EYD00_00405
Exosomal proteins of breast cancer cells
EYD00_00405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QBJ12023
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All DBs
Position
circular:complement(83295..85007)
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AA seq
570 aa
AA seq
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MSELSLGHPQNAVIGKRWLSSYPPGVPSEIPVSTNASLVDLLEKSCVQFADRKAFSSMGK
SLTYRELDAETRAVAAWLQSRGLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLY
TPRELEHQLKDSGAKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGLKGHIVNLVVR
KVKKLVPAYTIPGSISFKAMLKEGQGFSLKPVSLTAQDIAFLQYTGGTTGVSKGAVLTHA
NLLANKLQISLWLDAAFNGQKDRPEVLNFICALPLCHIFALTVNSLMGIALGGHNLLIAN
PRDIPGFVKELSHYQPHIFPGINTLFNALMNNEDFRKLDLSSLILVLGGGMAVQRPVAER
WLSIVGCPIAEGYGLSETSPVATVNRLDSTEFSGTIGLPISSTEIDIRDEDGNSLPTGEV
GEICIRGPQVMAGYWQRPDETAKAMTSDGFFRSGDMGFMDERGYTKIVDRKKDMILVSGF
NVYPNEVEEVAASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTN
YKRPKIIEFRTELPKSNVGKILRRELRNLN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgtccctgggacacccgcagaacgccgtcattgggaagcgctggctgtct
tcctatccgccgggcgttccttccgaaattcccgtatcgaccaatgcctccctcgtcgat
cttctcgaaaagagctgtgtgcagtttgccgaccggaaggccttttccagcatgggaaag
tcgctgacctaccgggaactggacgctgaaacccgagccgtcgccgcctggctgcagtcc
agaggactggaaaagggcgaccgggttgccgtgatgatgccgaacatcctgcaaaatccg
gttgcggtctatggaatcctgcgggcaggcatggtggtggtcaatgtcaatccgctttac
acaccgcgcgagctggaacatcagctgaaggattccggcgcgaaggcgcttttcgtgctg
gagaactttgcacatgtggcgcagcaggcggtgccgaaaaccgcggtgcggcacgtggtc
gtcgcggcgatgggcgatcttctcggcctcaagggacatatcgtcaatctggtggtccgc
aaggtcaagaaactggtgcccgcctataccattcccggctccatcagcttcaaggcgatg
ctgaaggaaggtcagggattttcgctgaagccggtcagcctcacggcgcaggacattgct
ttccttcaatataccgggggcacgacgggtgtatccaagggtgcggttctcacgcatgcc
aaccttctggccaacaagcttcagatcagcctgtggctggacgccgccttcaacggccag
aaggatcgccctgaagttctcaacttcatctgcgcgctgccgctctgccacatcttcgcc
ttgacggtgaattcgctgatgggcattgcgcttggcggccacaatctgctgattgccaat
ccgcgcgatattcccggttttgtgaaagaattgtcgcattatcagccgcatattttcccc
ggcatcaatacgcttttcaacgcgctgatgaacaacgaggatttccgcaagctcgatctg
tcgtcgctcattctggttctcggcggcggcatggcggtgcaaaggcctgtcgcggaacgc
tggctttccatcgtcggctgccccattgcggagggttacggcctctccgagacatcgccg
gttgccaccgtcaaccgcctcgattccacggagttcagcggaaccatcggcctgccgatc
tcttccaccgaaatcgatattcgcgacgaggacggcaacagcctgcccaccggagaggtc
ggagaaatctgcattcgtgggccgcaggtgatggcgggttattggcagcggccggacgag
acggcaaaggcgatgacatcagacggcttcttccgttccggcgacatgggcttcatggat
gaacgcggttataccaagatcgtcgaccgcaagaaggacatgatcctcgtctccggtttc
aacgtctatccgaacgaggtggaggaagtggccgccagccatccaggcgtcctggaatgc
gccgccatcggcgttccggacgagcactccggcgaaaccgtcaagctttttgtggtcaag
aaggaccagtcgctcacggaagcggaactcaaggctttctgcgccaagaacctgacaaac
tacaagcggccgaagatcatcgagttccgtaccgagctgccgaaatcgaatgtcggcaag
atcctgcggcgcgaattgcgcaatctgaactga
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