KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_00640
Entry
EYD00_00640       CDS       T05906                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:agt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agt03400]
    EYD00_00640
Enzymes [BR:agt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EYD00_00640
    5.6.2.6  RNA 3'-5' helicase
     EYD00_00640
DNA repair and recombination proteins [BR:agt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EYD00_00640
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: QBJ12063
LinkDB
Position
circular:129592..132111
AA seq 839 aa
MKHTESPISGIDVGTLPLSFQKWFVEKGWSPRAHQLELMARARGGENMLLIAPTGAGKTL
GGFMASLTDLTERGKIPPGSGFVGVHTLYISPLKALAVDIERNLTKPVSEMGLPIVIETR
TGDTPQAKRQRQKVRPPDILLTTPEQVSLLLANKEAERFFRDLKYVVLDELHSLVTSKRG
HLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGKPPAGLITVEGGAKPDIS
ILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRSQAERVFQELWTINDDNLPIA
LHHGSLDAGQRRRVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRANHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGALDVLAQHVLGMAC
AEPFDADELYREVTSASPYADLPRATFDRVVGFTATGGYALRTYERYARIRQMKDGRWRV
SNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEEYFLEQLVQGDTFL
FAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVRSMLADPTRWHALP
DQVRDWLAIQKEKSVIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQTLGMLLTRRLERA
GAKPMGFVATDYSLAIWAMEDIGMRLKSRRLSLADLLDEDMLGDDLEAWLDESFMLKRTF
RNCAIISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRRDAAAGLLDIG
RLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLAEAADELIAEAMS
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaaacacaccgagtcccccatttccggcatagatgtcggcaccttgcccctttcattc
cagaaatggtttgtcgaaaaagggtggtctccgcgcgcccatcagctggagcttatggcg
cgggcacggggcggcgagaacatgttgctgatcgcgcccaccggtgctggcaagacgttg
ggcggcttcatggcctcgctcaccgatctgacagagcggggcaagataccgcctggctcc
ggctttgtcggcgtgcacaccctctacatctcaccgctgaaggcgcttgcagtcgatatc
gagcgtaatctcaccaagcccgtttccgaaatgggtctgccgattgtcatcgaaacccgc
accggcgatacaccccaggcgaaacgccagcgccagaaggtgcgcccgccggatatcctg
ctgaccacaccggaacaggtctcgctgctgctcgccaacaaggaggccgagcgctttttc
cgcgacctgaaatatgtggtgctggatgagctgcattcgctcgtcacctccaaacgcggc
catctgctgtcgctggcgctcgcccgcgtgcgccggcatgcgcccgatgtccgtttcatc
ggcctttcggccacggtggcggagccgatggatttgcgccgttatcttgcaccgcagggg
caggggaagccgcccgccggcttgataaccgtcgaaggcggtgcaaagccggatatttcc
atcttgcacacggaagaacgcatcccatggtccggccattcagcgcgttatgccggaaag
gacttatacgaagcgttgaagcaacatcagacgacgctggtgtttgtcaacacacgctcg
caggcggaaagggtctttcaggagctctggacgatcaatgacgacaatttgccgatcgca
ctgcatcacggctcgctggatgccgggcagcgccgcagggtggaagcggccatggcggaa
aacaggttacgtgccgttgttgccacctccaccctcgatctcggcatagactggggtgac
gttgaccttgtcgtgcatgtcggcgcgccgaagggcgctagccgcctcgctcagcgtatc
ggccgtgccaaccaccgcatggatgagccatcaaaggcgatcctcgttcccgccaaccgc
ttcgaggtgatggaatgccgggcagcgctggatgccaactatatcggcgcgcaggatacg
ccgccgatcgccgaaggcgcgcttgatgttctcgcccagcacgtactcggcatggcctgt
gccgagcctttcgatgcggatgaactttatcgcgaagtcaccagcgcctcgccctatgcc
gacctgccgcgtgccaccttcgatcgggtggtgggttttactgccaccggcggctacgcg
ctgcgcacctatgaacgttatgcccgcatccgccagatgaaggacggtcgctggcgcgtg
tccaatccggcggtagcgcagcaatatcgcctcaacctcggcaccatcgtcgaggcggcg
gaactcaatgtccgcatggtcaagcgcaatgccaagggcacggtcggtcgcggtggcatg
tcgctcggcaaggtcgaggaatatttcctagagcagctggtgcagggcgatacttttctc
tttgccggcaaggtgctgcggttcgagggcatcagggagaatgaatgcctggtctcacag
gccttttccatggatccgaagataccctcctatgccggtggcaaatttccgctttccacc
tacctggcagatcaagtgcgctccatgctggcagacccgacacggtggcatgccctgccg
gatcaggttcgcgactggctggcaatccagaaggagaagtcggtcattcccaagcgcgac
gagctactggtggagaccttccccttccgtaagcgcttcttcatggtcatgtatcccttc
gagggacggctggcgcatcagacactcggtatgcttctgacgagacggctggaacgggcc
ggagcaaaaccgatgggttttgtcgccaccgattattcgctggccatctgggccatggag
gatatcggcatgcggctgaaatcccgccgcctgtcgctggccgaccttctcgatgaggac
atgcttggcgacgatctggaagcatggctggacgaatccttcatgctgaaacgtaccttc
cgcaactgcgccatcatttccggcctcattgagcgccgccatccgggcaaggaaaagacc
ggacggcaggtcacggtctccgccgatcttatttatgacgttcttcgcagccatgagccg
gatcatatcctgctggaagcgacgcgacgcgatgccgcagcaggacttttggatattggc
cgtcttggcgatatgctgaagcgaatcaagggacacaccacgcatcgcgcgctggagcac
gtttcacccctcgccgttccggtcatgctggaaatcggccgggagacggtggcgggcgaa
gcgatggacgatgtgctggcggaagccgctgatgagctgatcgccgaggccatgtcctga

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