Agrobacterium sp. 33MFTa1.1: EYD00_01915
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Entry
EYD00_01915 CDS
T05906
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agt03009
]
EYD00_01915
Enzymes [BR:
agt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EYD00_01915
Ribosome biogenesis [BR:
agt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EYD00_01915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_15
Methyltransf_25
UPF0020
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QBJ12280
LinkDB
All DBs
Position
circular:complement(395002..396252)
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AA seq
416 aa
AA seq
DB search
MSTQTVTIKSLGAQGDGIAHCPDGPVYVPFALPGETVAIAKVKDHGTVMSITEASPERRT
PACRHFGPEGKNGTCGGCSLQHLADEPYHAYKRELVVSALKSKGLTPDVDNLVICHPGER
RRAVFAARKTEKGLLLGFSQANSHHIVAIEECPVTSPGIVSRLDAIRAIGLSMVANAEPF
RMTVLETLSGLDISVDGIKSVSDKQRRTLTETVLAMRGIARVSLSGEILIEPQKPIIEFG
GVAVSPPAGSFTQATKQAEDAMAELVLAHVGKSKRIADLFCGSGTFALRLARVGKVHAVE
AEDKPLKALDFAARNTQGLKPVSVEKRDLFRRPLMTSELKNYDAVVFDPPRAGAEFQCKE
LARSTVKKIVAVSCNPLTLARDLAILTEGGYRITRVTPVDQFLWSPHVEAVATLEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacaaaccgtcaccatcaagagcctcggcgcccagggcgatggcattgcgcac
tgtcccgacggcccggtctatgtgcccttcgcgttgcccggcgagacggtcgccatcgcc
aaggtgaaggatcacggcaccgtgatgtcgattacggaagcctcacccgagcgccgtaca
cccgcctgccgccatttcggcccggagggcaagaatggcacctgcggcggctgttcgctg
caacatctcgccgacgagccttaccatgcatacaagcgggaactggtggtctcggcactg
aaatcgaagggcttgacgcccgatgtggataatctcgtcatctgtcaccctggcgagcgc
cgccgtgcggtgttcgccgcccgcaagacggaaaagggcctgctgctcggcttcagccag
gcgaacagccaccacatcgtcgccattgaggaatgtcccgtcacctcgcccggcatcgtc
tcgcgactggatgccatccgcgccatcggactttcaatggtggcgaatgcggaacccttc
cggatgacggtgctggagaccctttccggcctcgatatttccgtcgacggcatcaagtcg
gtcagcgacaagcagcgccgcacgctcacggaaacggttcttgccatgcgcggcattgcg
cgtgtttcactgtcgggtgagatactgatcgaaccccagaagccgatcatcgagtttggc
ggggtggcggtatcgccgccggccggcagcttcacgcaggcgacgaagcaggcggaggac
gccatggcggagctcgtgcttgcccatgtcggcaagtccaaacgcattgccgatctcttc
tgcggctccggcacatttgcgctgcggcttgcgcgcgttggcaaggtgcatgcggtggag
gcggaagacaagccgctgaaggcgctggatttcgccgcccgcaacacgcagggcctgaag
ccggtcagcgtcgagaagcgcgatctcttccgccgccccctgatgacaagcgagctaaag
aattacgacgccgtcgtcttcgatccgccacgcgcgggcgcggaattccagtgcaaggaa
ctggcacgcagcacggtaaagaagatcgtggccgtgagctgcaacccgctgacactggcg
cgcgatctcgccatcctgaccgagggcggctatcgcatcacccgcgtcacgccggttgac
cagttcctgtggtcgccgcatgtggaagcggtggcgacgctggagaaataa
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