Agrobacterium sp. 33MFTa1.1: EYD00_01925
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Entry
EYD00_01925 CDS
T05906
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt02020
Two-component system
agt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYD00_01925
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EYD00_01925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
agt02035
]
EYD00_01925
Bacterial motility proteins [BR:
agt02035
]
Flagellar system
Chemotaxis proteins
MCPs
EYD00_01925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CHASE3
HAMP
DUF948
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
QBJ12282
LinkDB
All DBs
Position
circular:397275..399296
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AA seq
673 aa
AA seq
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MSLKNLPINLKLIATFCALMGVCLLASAVVFWQTLGSERVTIENNRTKDIIQAVDGATAA
MLEQAVNQRGFLLFRSDSTYNDVFAQRDIMLKKLDEARALAAGQPDILKSIDDMQKSATV
FFKELAEPQIAARKTTEAPISEIIEIGRNQAKGQLDGFRASAAKIKEQLNGLSTAYAAEQ
QAAARKLEYALLGGGAVAGLLAVILIWALSRSIVTPIVGMTAAMSRLADGDLTTEVPATD
RGDEVGKMAKAVMVFKEAGLEKARLAGETDRMRSATEAERRRTEEEKARDEAASAFASAE
LGKGLAALADGDLSYRIETPFAPAIDPVRVNFNSAVEKLQQALRTVGENAAAINAGASEM
LSAADDLSRRTEQQAASIEETAAALEEVTTTVRDSARGAEDAGNLVQRARAGAEKSGVVV
RKAVAAMREIEKSSGEIGNIIGVIDDIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVR
ELAQRSANAAKEIKTLISASSQQVENGVNLVDETGKALELIVSEVEEINAHVSAIVVAAR
EQATGLQEINTAVNTMDQGTQQNAAMVEQQTAASHSLAREAEALNSLLGQFRMGGARTAV
ASAGGYSAPRPSSAKPAFQPAPAAPIRKAPVKSASATARPVASPARALGQSLARAFGGAA
EAPAAKDQDWTEF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaaaaatctccccattaatctgaagctcatagccaccttctgtgccttgatg
ggcgtgtgcctgctcgcttccgcggtcgtattctggcagacgctggggagcgagcgtgtc
acgattgaaaacaaccgcaccaaggatatcatccaggccgtggatggcgcgacggcagcc
atgctggaacaggccgtcaatcagcgcggcttcctgctgttccgcagtgacagcacctat
aatgacgtgttcgcccagcgcgatatcatgctgaagaagcttgatgaagcgcgcgccctt
gctgccggccagccggacatcctgaaatccatcgacgacatgcagaaatccgccaccgtg
ttcttcaaggaactggcggaaccgcagatcgccgcacgcaagacgaccgaagcgccgatt
tccgaaatcatcgaaatcggccgcaatcaggccaagggccagcttgacggcttccgtgcc
tcggccgccaagatcaaggaacagctgaatggcctgtccaccgcttacgctgcagaacag
caggctgctgcccgcaagctggaatatgcccttctcggcggtggcgccgtcgccggcctt
ctcgccgtgatcctgatctgggcgctttcgcgctccatcgttacgccaatcgtcggcatg
acagcggcgatgagccggcttgccgatggcgatctgacgacggaagttccggccacggat
cgtggcgacgaagtcggcaagatggcaaaggctgtaatggtcttcaaggaagccgggctt
gaaaaagcccgccttgccggtgagaccgatcgcatgcgctccgcgacggaagcagaacgt
cgccgcaccgaggaagaaaaagccagggacgaggccgccagcgcttttgccagcgccgag
cttggcaagggccttgcggctctcgcggatggcgatctttcctatcgcattgaaacgcct
tttgcgcctgcgattgatccggttcgtgtgaatttcaacagcgccgtcgaaaaactccag
caggcattgcgcacggtcggcgagaacgcggccgccatcaatgccggcgcttcggaaatg
ctctccgccgccgacgacctgtcgcgccgcaccgaacagcaggcggcctccatcgaagag
accgctgcggcgctcgaagaagtcaccaccaccgtgcgtgatagcgcccgtggtgcggaa
gatgccggcaatctggtccagcgcgcccgcgccggtgcggaaaagtcgggtgttgtggtc
cgcaaggcggttgccgccatgcgcgagatcgagaagtcctcgggcgaaatcggcaacatc
atcggcgtcatcgacgatatcgctttccagaccaacctcctggcgctgaatgccggtgtg
gaagccgcccgtgccggtgatgccggcaagggctttgcggtggtcgcgcaggaagtccgt
gaacttgcccagcgttcggccaatgccgccaaggaaatcaagaccttgatcagcgcttcc
agccagcaggtggaaaacggtgtcaatctcgtcgatgaaaccggcaaggcgctggaactc
atcgtctcggaagtcgaagagatcaacgcccatgtcagcgccatcgttgtcgctgcccgc
gaacaggccaccggcctgcaggaaatcaacacggctgtgaacaccatggatcagggcacg
cagcagaacgccgccatggtggagcagcagaccgccgccagccattcgctggcccgcgaa
gcggaagcgctgaacagcctgcttggccagttcaggatgggcggcgcacgcaccgccgtt
gcgagcgccggcggatattccgctccgcgcccatcttcggccaagcctgccttccagcct
gcgccggccgcgccgatccgcaaggctccggtaaaatcggcctctgcaacagcaaggcct
gtcgcatcgccggcccgtgcactcggccagagccttgcccgcgccttcggtggtgctgcc
gaagcaccggctgcgaaggatcaggactggacggagttctga
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