Agrobacterium sp. 33MFTa1.1: EYD00_04075
Help
Entry
EYD00_04075 CDS
T05906
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EYD00_04075 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
agt01007
]
EYD00_04075 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agt03016
]
EYD00_04075 (aspS)
03029 Mitochondrial biogenesis [BR:
agt03029
]
EYD00_04075 (aspS)
Enzymes [BR:
agt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
EYD00_04075 (aspS)
Amino acid related enzymes [BR:
agt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EYD00_04075 (aspS)
Transfer RNA biogenesis [BR:
agt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EYD00_04075 (aspS)
Prokaryotic type
Other AARSs
EYD00_04075 (aspS)
Mitochondrial biogenesis [BR:
agt03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EYD00_04075 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QBJ12641
LinkDB
All DBs
Position
circular:804084..805871
Genome browser
AA seq
595 aa
AA seq
DB search
MHRYRSHTCAALRKSDVGETVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK
VAETVRGEWVIRIDGLVKARSEDTVNKGMATGEIELYAQEIEVLGVAKELPLPVFGEPDY
PEDVRLKYRFLDLRRETLHKNIVKRTQIISAMRTGMADAGFAEYTTPILTASSPEGARDF
LVPSRIHEGKFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE
MSFVTQEDVWTTMEPMMTAVFEKFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVMQ
AVTEHFDGSGFKVFANMIASNPKVQVWAIPAKTGGSRAFCDRMNAWAQSQGQPGLGYIFW
KEEDGKVGGSGPLAKNIGEERTEALRQQLGLEAGDACFFVAGDPAKFYKFAGEARTRAAD
ELNLIDRDRFEMCWIVDFPFFEYNEEEKKIDFAHNPFSMPQGGLEALEGQDPLSIKAFQY
DAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQTDVEERFGGLYRAFQYGAPPHGGCAFG
IDRVVMLLVGAKNLREITLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKKD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgttaccgcagccacacctgtgccgctctccgcaagtccgacgtcggcgaaacc
gttcgcctttccggttgggttcatcgcgtgcgagatcatggcggcgttctcttcatcgac
cttcgcgaccattacggcatcacccaggtggttgccgatcctgacagcccggctttcaag
gttgcggaaaccgtacgcggcgaatgggtcatccgcatcgacggcctcgtcaaggcgcgt
tcggaagacaccgtcaacaagggcatggcgaccggcgagatcgaactttacgctcaggag
atcgaggttctcggcgtcgccaaggagctgccgctgccggtcttcggtgagcctgactat
ccggaagacgttcgcctgaagtaccgcttcctcgacctgcgccgcgaaacgctgcacaag
aacattgtcaagcgcacgcagatcatctccgccatgcgcaccggcatggccgatgccggc
tttgccgaatatacgacgccgatcctcacggcctcctcgccggaaggtgcacgcgacttc
ctcgtgccgtcgcgtattcatgagggcaagttcttcgcgctgccgcaggcgccgcagcag
tacaagcagcttctgatggtggcgggtttcgaccgttacttccagatcgcgccgtgcttc
cgcgatgaagacccgcgcgccgaccgcctgccgggcgaattctaccagctcgacgtcgaa
atgagcttcgtgacccaggaagatgtctggaccacgatggagccgatgatgactgccgtc
ttcgaaaagtttgccgaaggcaagcctgtcaccaaagagtggccgcgcattccctatgat
gaagcgatccgcaaatacggctccgacaagccggacctgcgcaacccgatcgtcatgcag
gccgtgaccgagcatttcgatggttcgggcttcaaggtcttcgcgaacatgatcgcctcc
aacccgaaggttcaggtctgggcaattccggccaagaccggcggttcgcgcgcattctgc
gaccgcatgaacgcctgggcgcagtctcagggtcagcccggcctcggttacatcttctgg
aaggaagaggacggcaaggtcggcggttccggtccgctcgccaagaacattggcgaggaa
cgcaccgaggcgctgcgccagcagctcggcctcgaggcaggtgatgcctgcttcttcgtc
gccggtgatcccgccaagttctacaagtttgccggtgaggcgcgcacccgcgctgccgat
gaactgaacctgatcgatcgcgaccgattcgaaatgtgctggatcgtcgacttccccttc
ttcgaatacaacgaagaagaaaagaagatcgatttcgcccacaaccccttctccatgccg
cagggtggtctggaagcgctggaagggcaggacccgctctccatcaaggccttccagtat
gacgccgtctgcaacggcttcgaaatcgcctccggttcgatccgtaaccagtcgcccgag
ttgatggtcaaggctttcgaaaaggttggcctgtcgcagaccgacgttgaagagcgcttc
ggcggtctctaccgcgccttccagtatggcgcgcctccgcatggcggttgcgctttcggt
atcgaccgtgtggtcatgctgctggtcggtgcgaagaacctgcgcgaaatcacgctgttc
ccgatgaaccagcaggcgcaggaccttctgatgaacgcgccgtcgccggcaacgccgacg
cagcttcgcgaactggcgctgcgcgtcgttccgtccaagaaagactga
DBGET
integrated database retrieval system
