Agrobacterium sp. 33MFTa1.1: EYD00_04135
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Entry
EYD00_04135 CDS
T05906
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agt01002
]
EYD00_04135
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agt01011
]
EYD00_04135
Peptidases and inhibitors [BR:
agt01002
]
Cysteine peptidases
Family C82
EYD00_04135
Peptidoglycan biosynthesis and degradation proteins [BR:
agt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EYD00_04135
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QBJ12653
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Position
circular:816862..818193
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AA seq
443 aa
AA seq
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MTKTSVSNSVSRRTLLRSAVSAGVAALAAPALAQDALNDLMGSSRRGNWDDQFDANTSRS
AVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPEVPASQQRLQIGVSDPSVQALRQR
LMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPADGVSGEYTTKALNVSAQIRLAQLQ
TNLVRIQSMSGDLGQRHLMVNIPAAAIEAVENERVVLRNTAVVGRASRPTHVINSKIYEV
ILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLIDGKGQEVSPTTVDWFAPKAPNLMF
RQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTSWLLR
DTPGWSRQEMERVIASRVNTPIKLAQEVPVYFVYITAWSAKDGVVQFRDDIYGKDGNAEL
ALNTTAGMEQPAGAVDDDLLPRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacatccgtttccaattccgtatcgcgccgcacgcttctgcgctcggccgtt
tccgctggtgtcgccgcgctcgctgcgccggccttggcgcaggacgcgcttaacgatctc
atgggttcctcgcgccgcggcaactgggatgaccagttcgacgccaatacgtcgcgttcg
gctgtgggcgtcgtttccaacaatccggtcctcggccgcgaagcccccgtctatatgcag
caggcgatcatgcaatatcagcagatcgtgcagaatggcggctggccggaagttccggcg
tcgcagcagcgtctgcagatcggcgtctccgatccctccgttcaggcactgcgccagcga
ctgatggtatcgggcgacctgccgcgtgaagccggcatttccagcgccttcgactcctat
gtcgatggcgcgctgaagcgtttccaggcccgtcatggccttccggctgacggcgtcagc
ggcgaatataccaccaaggctctcaatgtgtccgcgcagatccgtctcgcgcagctgcag
accaacctcgtgcgcatccagtccatgtccggcgatctcggacagcgtcacctgatggtg
aacattccggccgccgccattgaagccgttgaaaacgaacgcgtcgtgctgcgcaacact
gccgttgtcggccgcgccagccgtccgacgcacgttatcaattcgaagatttacgaggtc
atcctcaacccctattggaccgcaccgcgctcgatcgtcgaaaaggacatcgtgccgctg
atgcagaaggatccgacctatctggagcggaacaatatccgccttatcgacggcaaggga
caggaagtctcgccgaccacggtcgactggttcgcgccgaaagcgccgaacctgatgttc
cgccaggaccccggcaagatcaacgccatgtcctcgacgaagatcaacttccacaatccg
aacaacgaatacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgcttc
gagtcctccggttgcgtccgcgtgcagaacgtgcgcgacctgacgtcgtggctgctgcgc
gatacgcccggctggtcgcgccaagaaatggaacgcgtcattgcctcgcgcgtcaacacg
ccgatcaagctcgcacaggaagtgcccgtctacttcgtctacatcaccgcatggtcggcg
aaggacggcgtggttcagttccgcgacgatatctacggcaaggacggcaatgccgaactg
gcgctgaacacgacggcgggcatggaacagccggccggtgccgtggacgacgatctgctg
ccgcgcaactga
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