KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_05260
Entry
EYD00_05260       CDS       T05906                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00010  Glycolysis / Gluconeogenesis
agt00020  Citrate cycle (TCA cycle)
agt00260  Glycine, serine and threonine metabolism
agt00280  Valine, leucine and isoleucine degradation
agt00310  Lysine degradation
agt00380  Tryptophan metabolism
agt00620  Pyruvate metabolism
agt00630  Glyoxylate and dicarboxylate metabolism
agt00640  Propanoate metabolism
agt00670  One carbon pool by folate
agt00785  Lipoic acid metabolism
agt01100  Metabolic pathways
agt01110  Biosynthesis of secondary metabolites
agt01120  Microbial metabolism in diverse environments
agt01200  Carbon metabolism
agt01210  2-Oxocarboxylic acid metabolism
agt01240  Biosynthesis of cofactors
Module
agt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
agt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
agt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:agt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EYD00_05260 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EYD00_05260 (lpdA)
   00620 Pyruvate metabolism
    EYD00_05260 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EYD00_05260 (lpdA)
   00640 Propanoate metabolism
    EYD00_05260 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EYD00_05260 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EYD00_05260 (lpdA)
   00310 Lysine degradation
    EYD00_05260 (lpdA)
   00380 Tryptophan metabolism
    EYD00_05260 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EYD00_05260 (lpdA)
   00670 One carbon pool by folate
    EYD00_05260 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:agt04147]
    EYD00_05260 (lpdA)
Enzymes [BR:agt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EYD00_05260 (lpdA)
Exosome [BR:agt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EYD00_05260 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 2-Hacid_dh_C DAO GIDA AlaDh_PNT_C Lys_Orn_oxgnase Thi4 Amino_oxidase 3HCDH_N Trp_halogenase
Other DBs
NCBI-ProteinID: QBJ12852
LinkDB
Position
circular:1040826..1042271
AA seq 481 aa
MAQSYDVIIIGSGPGGYIAAIRAAQLGMKVAVVEREHLAGICSNWGCIPTKALLRTADVM
HTATHAKDYGLTLEGSIKPDVKAIVARSRGIAARMNNGVGFLFKKNKVDIIWGEAKITKP
GEIVVGKSTKPVVQPQGPVPKNTLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEEMPKSLLVMGSGAIGIEFASFYRTMGVDVTVVEIMSQVMPVEDAEISTFAKKQLE
KQGMKIHLETKVSKVEKGANSITATLEKKDGSSEKITADRMISAVGVVANIEGIGLEAAG
VKTDRGFIVIDGYGKTNVPGIYAIGDVAGPPLLAHKAEHEAVICVEKIAGLPNVHPMDKL
KIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFAANGKAVALGEDQGMVKTIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTISESMKESVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctcaatcatatgacgtcatcatcatcggttcgggaccgggcggttacattgccgcg
atccgcgcagcccagctcggcatgaaggttgccgtcgtggagcgtgagcatctggccggc
atctgctccaactggggctgcattcccaccaaggcgctgctgcgcaccgccgatgtcatg
cacaccgccacccacgccaaggattacggcctgacgctggaaggctcgatcaagcctgac
gtcaaggcaatcgtggcgcgctcgcgcggcattgcagcccgcatgaacaatggcgtcggt
ttcctgttcaagaagaacaaggtcgatatcatctggggtgaagccaagatcaccaagccg
ggcgaaatcgtggtcggcaagtccaccaagccggtggtgcagccgcagggtccggttccg
aagaacacgctgggcgagggtacttatacagccaagcacatcatcgtcgccacgggcgcc
cgcccgcgcgcgctgcccggcattgagcccgatggcaagctgatctggacctatttcgag
gcaatgaagccggaagaaatgccgaagtcgctgctcgtcatgggctccggcgcgattggc
atcgaattcgccagcttctaccgcaccatgggcgtggacgtgaccgttgtcgaaatcatg
agccaggttatgcctgtcgaagatgcggaaatctccaccttcgccaagaagcaactcgaa
aagcagggcatgaagatccatctggaaaccaaggtttccaaggtggaaaagggcgcaaac
tccatcaccgcgacgctggagaagaaggacggttcttccgaaaagatcacggctgatcgc
atgatctctgccgttggggtcgttgccaatatcgaaggcatcggcctcgaagctgccggc
gtgaagaccgatcgcggctttatcgtcatcgacggctacggcaagaccaacgttcccggc
atctacgccatcggcgatgtcgcaggtccgccgctgcttgcccacaaggctgagcacgag
gctgtcatctgcgtcgaaaagatcgccggtctgccgaatgttcacccgatggacaaactg
aagattcccggctgcacctattgcaacccgcaggtcgcttctgtcggtctcaccgaagcc
aaggccaaggaacagggccgcgatatccgcgtcggccgcttctcctttgcggcgaacggc
aaggctgtcgcgctgggtgaagatcagggcatggtcaagaccatcttcgacaagaagacc
ggcgagctgctcggcgcgcatatggtcggggcggaagtgaccgaactcatccagggcttc
gtcgtcgctatgaatctggagacgacagaagaagatttgatgcacacgatcttcccgcat
ccgaccatttcggaatcgatgaaggaaagcgtgctcgatgcctatggacgtgtgcttaac
gcataa

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