Agrobacterium sp. 33MFTa1.1: EYD00_05260
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Entry
EYD00_05260 CDS
T05906
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00010
Glycolysis / Gluconeogenesis
agt00020
Citrate cycle (TCA cycle)
agt00260
Glycine, serine and threonine metabolism
agt00280
Valine, leucine and isoleucine degradation
agt00310
Lysine degradation
agt00380
Tryptophan metabolism
agt00620
Pyruvate metabolism
agt00630
Glyoxylate and dicarboxylate metabolism
agt00640
Propanoate metabolism
agt00670
One carbon pool by folate
agt00785
Lipoic acid metabolism
agt01100
Metabolic pathways
agt01110
Biosynthesis of secondary metabolites
agt01120
Microbial metabolism in diverse environments
agt01200
Carbon metabolism
agt01210
2-Oxocarboxylic acid metabolism
agt01240
Biosynthesis of cofactors
Module
agt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
agt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EYD00_05260 (lpdA)
00020 Citrate cycle (TCA cycle)
EYD00_05260 (lpdA)
00620 Pyruvate metabolism
EYD00_05260 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EYD00_05260 (lpdA)
00640 Propanoate metabolism
EYD00_05260 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EYD00_05260 (lpdA)
00280 Valine, leucine and isoleucine degradation
EYD00_05260 (lpdA)
00310 Lysine degradation
EYD00_05260 (lpdA)
00380 Tryptophan metabolism
EYD00_05260 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EYD00_05260 (lpdA)
00670 One carbon pool by folate
EYD00_05260 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agt04147
]
EYD00_05260 (lpdA)
Enzymes [BR:
agt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EYD00_05260 (lpdA)
Exosome [BR:
agt04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EYD00_05260 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
2-Hacid_dh_C
DAO
GIDA
AlaDh_PNT_C
Lys_Orn_oxgnase
Thi4
Amino_oxidase
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
QBJ12852
LinkDB
All DBs
Position
circular:1040826..1042271
Genome browser
AA seq
481 aa
AA seq
DB search
MAQSYDVIIIGSGPGGYIAAIRAAQLGMKVAVVEREHLAGICSNWGCIPTKALLRTADVM
HTATHAKDYGLTLEGSIKPDVKAIVARSRGIAARMNNGVGFLFKKNKVDIIWGEAKITKP
GEIVVGKSTKPVVQPQGPVPKNTLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEEMPKSLLVMGSGAIGIEFASFYRTMGVDVTVVEIMSQVMPVEDAEISTFAKKQLE
KQGMKIHLETKVSKVEKGANSITATLEKKDGSSEKITADRMISAVGVVANIEGIGLEAAG
VKTDRGFIVIDGYGKTNVPGIYAIGDVAGPPLLAHKAEHEAVICVEKIAGLPNVHPMDKL
KIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFAANGKAVALGEDQGMVKTIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTISESMKESVLDAYGRVLN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcatatgacgtcatcatcatcggttcgggaccgggcggttacattgccgcg
atccgcgcagcccagctcggcatgaaggttgccgtcgtggagcgtgagcatctggccggc
atctgctccaactggggctgcattcccaccaaggcgctgctgcgcaccgccgatgtcatg
cacaccgccacccacgccaaggattacggcctgacgctggaaggctcgatcaagcctgac
gtcaaggcaatcgtggcgcgctcgcgcggcattgcagcccgcatgaacaatggcgtcggt
ttcctgttcaagaagaacaaggtcgatatcatctggggtgaagccaagatcaccaagccg
ggcgaaatcgtggtcggcaagtccaccaagccggtggtgcagccgcagggtccggttccg
aagaacacgctgggcgagggtacttatacagccaagcacatcatcgtcgccacgggcgcc
cgcccgcgcgcgctgcccggcattgagcccgatggcaagctgatctggacctatttcgag
gcaatgaagccggaagaaatgccgaagtcgctgctcgtcatgggctccggcgcgattggc
atcgaattcgccagcttctaccgcaccatgggcgtggacgtgaccgttgtcgaaatcatg
agccaggttatgcctgtcgaagatgcggaaatctccaccttcgccaagaagcaactcgaa
aagcagggcatgaagatccatctggaaaccaaggtttccaaggtggaaaagggcgcaaac
tccatcaccgcgacgctggagaagaaggacggttcttccgaaaagatcacggctgatcgc
atgatctctgccgttggggtcgttgccaatatcgaaggcatcggcctcgaagctgccggc
gtgaagaccgatcgcggctttatcgtcatcgacggctacggcaagaccaacgttcccggc
atctacgccatcggcgatgtcgcaggtccgccgctgcttgcccacaaggctgagcacgag
gctgtcatctgcgtcgaaaagatcgccggtctgccgaatgttcacccgatggacaaactg
aagattcccggctgcacctattgcaacccgcaggtcgcttctgtcggtctcaccgaagcc
aaggccaaggaacagggccgcgatatccgcgtcggccgcttctcctttgcggcgaacggc
aaggctgtcgcgctgggtgaagatcagggcatggtcaagaccatcttcgacaagaagacc
ggcgagctgctcggcgcgcatatggtcggggcggaagtgaccgaactcatccagggcttc
gtcgtcgctatgaatctggagacgacagaagaagatttgatgcacacgatcttcccgcat
ccgaccatttcggaatcgatgaaggaaagcgtgctcgatgcctatggacgtgtgcttaac
gcataa
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