Agrobacterium sp. 33MFTa1.1: EYD00_05470
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Entry
EYD00_05470 CDS
T05906
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agt03032
]
EYD00_05470 (gyrA)
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_05470 (gyrA)
Enzymes [BR:
agt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EYD00_05470 (gyrA)
DNA replication proteins [BR:
agt03032
]
Prokaryotic type
DNA Topoisomerases
EYD00_05470 (gyrA)
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EYD00_05470 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SPT6_acidic
Motif
Other DBs
NCBI-ProteinID:
QBJ12890
LinkDB
All DBs
Position
circular:1085834..1088626
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AA seq
930 aa
AA seq
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MTDQSPPGGGKLPPGIEPISIMEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKFHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSI
DGDPPAAERYTECRLDKAAHSLLDDLDKETVDFRDNYDGTLQEPVVIPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALIDNPAIELPELMQIIPGPDFPTGALIMGRSGIRSA
YETGRGSVIMRGRATIEPMRGDREQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLR
DESDRQGYRVVIELKRDANADVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRA
FVSFREDVVSRRTKYLLRKARERAHVLVGLAISVANIDEVIRVIRHAPDPASAREELMTR
RWPAQDVESLIRLIDDPRHRINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GAEISEYLEILSSRLRIMQIVKDELSAVRDEFGTPRRSEIVEGGPDMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSKGKALINMLPLEPGERITTIMPLPEDETTWETLDVMFSTTRGTVRRN
KLGDFVQVNRNGKIAMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGR
NSVGVRGINLAEGDRIISMTIVGHVEAEPWERAAYLKRSAAERRAAGVDEDDIALVGEEV
TEEGELSEERYQELKAREEFVLTVSVKGFGKRSSSYDFRTSGRGGKGIRATDTAKTSEIG
ELVAAFPVEEGDQIMLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINE
PEGDDEAENGNGEEADDNLPTTPEAPESEA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccagagcccccccggcggcggaaagcttccgccaggcattgaaccgatttcc
atcatggaggaaatgcagcggtcgtatctcgattacgccatgagcgttatcgtgtcccgc
gcgcttcccgatgtgcgagacggcctgaagccggttcatcgccgtattctgtacggcatg
tccgaactcggcatcgactggaacaagaaatacgtcaaatgcgcccgcgtaaccggggac
gtgatgggtaaattccatccgcacggcaactcggcaatctatgacgcgctggcgcgtatg
gcgcaggactggtcgctccgcctgccgctgatcgacggccagggcaacttcggctccatc
gacggtgatccgccggccgctgaacgttataccgaatgccgtctggataaggccgcgcat
tcgctgcttgacgatctcgacaaggaaacggtcgatttccgtgacaactatgacggcacc
ttgcaggagccggtcgtcattccggccaagttcccgaacctgctggtcaacggggcaggc
ggcatcgcggtcggcatggccacgaacatcccgccgcataacctgtcagaggttatcgat
ggctgtatcgccctgatcgacaatccggcgatcgagctgccggaactgatgcagatcatt
ccgggccctgatttcccgaccggtgcgctgatcatgggccgttccggcatccgctcggct
tacgaaacgggccgcggatcggtcatcatgcgtggccgcgcgacaatcgagccgatgcgt
ggcgaccgcgagcagatcatcatcaccgaagttccctatcaggtgaacaaggcgtcgatg
atcgaaaaaatggctgagttggtaaaggaaaagcgcatcgagggcatttccgacctgcgc
gacgaatccgaccgccagggttatcgcgtcgtcatcgaattgaagcgcgacgccaatgca
gacgtcatcctgaaccagctttaccgctacacaccgctgcagacctcgtttggctgcaac
atggtggcgctgaacggcggcaagcccgagcagatgacgctgctcgacatgttgcgtgca
ttcgtgtccttccgcgaagatgtcgtcagccgtcgcacgaagtatctgctgcgcaaggcg
cgcgagcgggcgcatgtgttggtcggtctggcgatttccgtcgcaaatatcgatgaggtc
atccgcgtcatccggcatgctcccgatccggcttcggcccgagaagaactgatgacgcgt
cgctggcctgcacaggatgtggaaagcctgatccgccttatcgatgatccgcgccaccgc
atcaacgaagacgggacttacaacctttccgaggaacaggcgcgcgccattctcgaattg
cgcctcgcacgtcttacagcgctcggccgcgatgaaattggcgacgagctgaacaagatc
ggcgctgagatcagcgaatatctggaaatcctgtcatcgcgcctgcgcatcatgcagatc
gtcaaggacgagctttccgccgtccgcgacgaattcggcacgccgcgtcgctccgagatc
gtcgagggcggtcccgatatggacgatgaagacctcatcgcccgcgaagacatggtcgtg
accgtttcgcatctcggttacatcaagcgcgtgccgctgacgacgtatcgtgcacagcgt
cgcggcggcaagggtcgctccggcatggcaacgcgcgatgaggatttcgtcaaccgtctg
ttcgtcgccaacacccacacgccggtcctgttcttctcctcgcgtggcatcgtctacaag
gaaaaggtctggcgtctgccgatcggcacgccgcagtccaagggcaaggcccttatcaac
atgctgccgctggaacccggcgagcgcatcaccaccatcatgccgttgcccgaggacgaa
acgacctgggaaacgcttgacgtgatgttctcgacgacgcgcggcacggttcgccgcaac
aagctcggcgatttcgtacaggtcaaccgcaacggcaagatcgccatgaagctggacgag
gagggcgatgaaatcctctccgtcgaaacctgtacggaccgcgacgatgtgctgctgacg
accgcgctcggccagtgcatccgcttccccgtggacgatgtacgcgtctttgccggccgc
aattccgtcggcgtgcgcggcatcaacctggccgaaggcgaccgcatcatctccatgacc
attgtgggccatgtggaagcggagccgtgggagcgtgcggcttacctcaagcgctcggct
gccgaacggcgtgccgcaggcgtggatgaggacgatatcgcgctcgtcggtgaggaagta
acggaagagggcgaactcagtgaggagcgctaccaggaactgaaggcgcgcgaagaattc
gtgctgacggtttccgtgaagggcttcggcaagcgttcatcgtcttacgatttccgcact
tcaggccgcggcggcaagggcatccgcgccaccgataccgcgaagacgtcggagatcggt
gaacttgttgcggccttcccggtggaagaaggcgaccagatcatgctggtttccgatggc
ggacagctcatccgtgtgcctgtgaacggcatccgcatcgccagccgcgcgaccaagggt
gtgacaatcttctcgaccgcgaaggatgagaaggtggtttccgtggagcgcatcaacgag
cctgaaggcgacgacgaggctgaaaatggcaatggcgaggaggcggatgacaatctgccg
accacgccggaggcaccggaaagcgaggcgtaa
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