Agrobacterium sp. 33MFTa1.1: EYD00_06430
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Entry
EYD00_06430 CDS
T05906
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00300
Lysine biosynthesis
agt00470
D-Amino acid metabolism
agt01100
Metabolic pathways
agt01110
Biosynthesis of secondary metabolites
agt01120
Microbial metabolism in diverse environments
agt01230
Biosynthesis of amino acids
Module
agt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EYD00_06430
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EYD00_06430
Enzymes [BR:
agt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EYD00_06430
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QBJ14492
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Position
circular:1272353..1273534
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AA seq
393 aa
AA seq
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MRDIVAKAGTPCFLYDAGAMRRAYRDLQATLSGFADIYYSVKANPLPAIIALFRQEGAGA
EIASAGEYRAAIKAGVAPENIIFAGPGKSRAELHEVIAGGIGEIHVESAEEIARIEAIGK
PVKASVRINPVPDAQAGAMRMGGKATAFGFDEEELENILALFRHAGVIELVGIHIYGGTQ
ILDADMLVSQWRHAISIAARMAEMLGKPLETIDLGGGLGIPYFAGEAPLDLAKVKAAVPD
LKALLKAHPLIADAHVIVEPGRFLAGPGGIYTAEVNSVKTSRGTTFVVTDGGMHHHLAAS
GNLGQIVKRNYPIVAPAMMQADHAETATIVGPLCTPLDTLARNAALPRLQAGDLIAILQS
GAYGASASPGDFLSHAVAKEVLVENGAFEMIGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgatatcgtcgccaaagccggaaccccatgctttctctatgatgctggcgcgatg
cgccgcgcctaccgcgatctccaggcgacgctctccggttttgccgatatctattattcg
gtgaaggccaatcccctgcccgccatcatcgcgctcttccggcaggaaggcgctggcgcg
gaaatcgcttccgccggcgaatatcgcgccgctataaaggctggtgtcgcgccggaaaac
atcatctttgccgggcccggcaaaagcagagccgaattgcacgaagtgatcgcgggcgga
atcggcgaaatccacgtggaaagcgccgaggaaattgcccgcatcgaggcaatcggcaaa
cccgtcaaggcctctgtccgcatcaatccggtgccggatgcgcaagccggcgccatgcgc
atgggcggcaaggccaccgcttttggtttcgatgaggaagaactggaaaatatcctggcg
cttttccggcatgcgggcgttatcgagctcgtcggcatccatatctatggcggcactcag
atcctcgatgcggacatgcttgtctcgcaatggcgacatgccatctcaattgccgcccgc
atggcggaaatgctcggcaagccgcttgaaaccatcgatctcggcggcggcctcggcatc
ccctacttcgccggcgaagcaccgctcgatctcgcgaaggtaaaagccgccgtgcccgat
ctgaaggcactgctgaaagcgcatccgctgatcgccgacgcccatgtcatcgtcgagccc
ggccgcttcctcgccggtccgggcggcatctatacggccgaagtcaattccgtgaagacc
tcgcgcggaaccaccttcgttgtgacggatggcggcatgcaccatcacctggccgcttcg
ggcaatctcggtcagatcgtcaagcgcaactaccccatcgttgcgcccgccatgatgcag
gccgaccacgcggagactgcaaccatcgtcggcccgctctgcacgccgctcgatacgctg
gctcgcaacgcggcattgccgaggctccaggccggtgacctcatcgccatcctgcagtca
ggcgcctatggcgcaagcgccagccccggggattttctaagccacgcggtggcgaaggaa
gtgctggtggaaaatggggcgtttgagatgatcgggcgataa
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