KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_06430
Entry
EYD00_06430       CDS       T05906                                 
Name
(GenBank) type III PLP-dependent enzyme
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
agt  Agrobacterium sp. 33MFTa1.1
Pathway
agt00300  Lysine biosynthesis
agt00470  D-Amino acid metabolism
agt01100  Metabolic pathways
agt01110  Biosynthesis of secondary metabolites
agt01120  Microbial metabolism in diverse environments
agt01230  Biosynthesis of amino acids
Module
agt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:agt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EYD00_06430
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EYD00_06430
Enzymes [BR:agt01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     EYD00_06430
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: QBJ14492
LinkDB
Position
circular:1272353..1273534
AA seq 393 aa
MRDIVAKAGTPCFLYDAGAMRRAYRDLQATLSGFADIYYSVKANPLPAIIALFRQEGAGA
EIASAGEYRAAIKAGVAPENIIFAGPGKSRAELHEVIAGGIGEIHVESAEEIARIEAIGK
PVKASVRINPVPDAQAGAMRMGGKATAFGFDEEELENILALFRHAGVIELVGIHIYGGTQ
ILDADMLVSQWRHAISIAARMAEMLGKPLETIDLGGGLGIPYFAGEAPLDLAKVKAAVPD
LKALLKAHPLIADAHVIVEPGRFLAGPGGIYTAEVNSVKTSRGTTFVVTDGGMHHHLAAS
GNLGQIVKRNYPIVAPAMMQADHAETATIVGPLCTPLDTLARNAALPRLQAGDLIAILQS
GAYGASASPGDFLSHAVAKEVLVENGAFEMIGR
NT seq 1182 nt   +upstreamnt  +downstreamnt
gtgcgcgatatcgtcgccaaagccggaaccccatgctttctctatgatgctggcgcgatg
cgccgcgcctaccgcgatctccaggcgacgctctccggttttgccgatatctattattcg
gtgaaggccaatcccctgcccgccatcatcgcgctcttccggcaggaaggcgctggcgcg
gaaatcgcttccgccggcgaatatcgcgccgctataaaggctggtgtcgcgccggaaaac
atcatctttgccgggcccggcaaaagcagagccgaattgcacgaagtgatcgcgggcgga
atcggcgaaatccacgtggaaagcgccgaggaaattgcccgcatcgaggcaatcggcaaa
cccgtcaaggcctctgtccgcatcaatccggtgccggatgcgcaagccggcgccatgcgc
atgggcggcaaggccaccgcttttggtttcgatgaggaagaactggaaaatatcctggcg
cttttccggcatgcgggcgttatcgagctcgtcggcatccatatctatggcggcactcag
atcctcgatgcggacatgcttgtctcgcaatggcgacatgccatctcaattgccgcccgc
atggcggaaatgctcggcaagccgcttgaaaccatcgatctcggcggcggcctcggcatc
ccctacttcgccggcgaagcaccgctcgatctcgcgaaggtaaaagccgccgtgcccgat
ctgaaggcactgctgaaagcgcatccgctgatcgccgacgcccatgtcatcgtcgagccc
ggccgcttcctcgccggtccgggcggcatctatacggccgaagtcaattccgtgaagacc
tcgcgcggaaccaccttcgttgtgacggatggcggcatgcaccatcacctggccgcttcg
ggcaatctcggtcagatcgtcaagcgcaactaccccatcgttgcgcccgccatgatgcag
gccgaccacgcggagactgcaaccatcgtcggcccgctctgcacgccgctcgatacgctg
gctcgcaacgcggcattgccgaggctccaggccggtgacctcatcgccatcctgcagtca
ggcgcctatggcgcaagcgccagccccggggattttctaagccacgcggtggcgaaggaa
gtgctggtggaaaatggggcgtttgagatgatcgggcgataa

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