Agrobacterium sp. 33MFTa1.1: EYD00_08165
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Entry
EYD00_08165 CDS
T05906
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EYD00_08165 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_08165 (uvrB)
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EYD00_08165 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EYD00_08165 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QBJ13367
LinkDB
All DBs
Position
circular:1584539..1587508
Genome browser
AA seq
989 aa
AA seq
DB search
MARSQKNSTSSPSGFEEAPQSSFEGAPLGGSVADWVKQLEAEAEASSVETQREIASKAGK
HRKKIEIEARKEAEKAATKTAKKTTASKTARGVSIGASSDPKTRAAAGLNPVAGLDVSLE
DAQSLAPGAVTATVDALSKLIESGNPLFKDGKLWTPHRPARPPKSEGGIAIEMVTDYKPS
GDQPTAIADLVEGLNSGDRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLY
SEFKNFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRAILERD
DCIIVASVSCIYGIGSVETYTAMTFQMQVGDKLEQRQLLADLVAQQYKRQDINFVRGSFR
VRGDTIEIFPAHLEDAAWRISMWGDEIESITEFDPLTGHKTGDLQSVKIYANSHYVTPRP
TLNGAIKSIKEELKLRLAELEKAGRLLEAQRLEQRTRYDVEMLEATGSCAGIENYSRYLT
GRNPGEPPPTLFEYIPDNALIFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDN
RPLRFEEWDAMRPQTISVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDD
VLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRL
GAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DNITGSMKRAMEETSRRREKQMAYNQEHGITPESVKARISDILDSVYERDHVRADISGVS
GKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELATMDDPM
AKEEARAVEGGGKNNRRSHLSISSPEGETAGRADGDAASTNESGKSLFAKPSLDEMGPGS
DAGKPLFRKNTLDEMTVGRTEKPVRGAVPDKPATEPGKRFSPLLEGQPERAADDLRPLVR
GKIGAGSYEDAGEQKRKSRTKGKTGRPGR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcacagaaaaactccacctcctcgccctcgggcttcgaggaagctccgcaa
tcgtcattcgaaggcgcgccgctcggcggcagcgttgccgattgggtcaagcaacttgag
gcggaagcggaagcatcctccgtggagacccagcgcgaaatcgcttcgaaggcgggcaag
caccgcaagaagatcgaaatagaagcgcgcaaggaagcggaaaaagccgccacaaagacg
gcgaaaaagaccaccgcgtcaaaaacggcacgcggcgtttcgatcggcgcgtcgagcgat
ccgaaaacgcgcgccgccgcgggtctcaatcctgtggcagggctcgatgtctccttggag
gatgcccagtccctggcaccgggcgcggtgacggcgacggtggacgcgctttccaaactg
attgaaagcggcaacccgctcttcaaggatggcaagctgtggacaccccacaggccggcc
cgtccgccgaaatcggaaggcggcatcgccatcgagatggtgacggactacaagccatcc
ggcgatcaaccgaccgccattgccgatctcgtcgaaggcctcaattccggcgaccgctcg
caggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtgatcgag
gccacacagcgtccggccgttattctggcgcccaacaagacgctggcggcccagctctat
tccgaattcaaaaacttctttccaaacaatgcggtggagtatttcgtttcctattacgat
tattaccagccggaagcctatgtgccgcgttccgacacctatatcgagaaggaatcgtcg
atcaacgagcagatcgaccgtatgcgccacgccgcaacccgcgccattctcgaacgtgac
gactgtatcatcgtcgcttcggtttcctgtatctatggtatcggttcggtcgagacctat
acggccatgaccttccagatgcaggtgggcgacaagctggagcaacgccagcttcttgcc
gacctcgtggcccagcaatacaagcggcaggacatcaacttcgtgcgcggctccttccgc
gtgcgcggtgatacgatcgaaatcttccccgcccaccttgaagatgcggcctggcgcatt
tccatgtggggtgacgagattgaatccatcaccgaattcgacccgctgaccggccataag
accggcgacctgcaatcggtgaagatttacgccaattcgcactatgtgacaccgcgcccg
acgctgaacggcgcgatcaagtcgatcaaggaagagctgaagctgcgcctcgccgagctt
gaaaaagccggccgcctgctggaagcccagcgtctggaacagcgcacgcgctacgatgtc
gagatgctggaggccacgggctcctgcgccggcatcgaaaactattcacgctatctcacc
ggccgcaatccgggcgagccgccgccgaccctgttcgagtatattcccgacaacgcgctg
atcttcatcgacgaaagccacgtcaccgttcctcagatcggcggcatgtatcgcggcgac
ttccgccgcaaggcaacgctggccgaatatggcttccgcctgccctcgtgcatggacaac
cgtcccctgcgcttcgaggaatgggacgccatgcgcccgcagaccatttccgtctccgcc
acccccggaggctgggaaatggagcaatccggcggcgtttttgccgaacaggtcatccgt
ccgaccggcctcatcgatcctccggtcgaagtccgctccgcccgcacccaggtggacgat
gttctcggcgaaatccgcgagaccgccgccaagggctaccgcacgctctgcaccgtgctg
accaagcggatggccgaagacctcaccgaatatctgcatgaacagggtgtccgcgttcgt
tacatgcactccgatatcgacacgctggagcgcatcgagatcatccgcgacctgcggctc
ggcgctttcgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgatattccggaa
tgtggtttcgtagccatcctcgacgcagacaaggaaggcttcctgcgctcggagacctcg
ctgatccagaccatcggccgcgccgcgcgtaacgtcgatggcaaggtcatcctttatgcc
gacaatatcaccggttcgatgaagcgggcgatggaggaaacctcccgccgccgtgaaaag
cagatggcctataaccaggaacatggcatcacgccggaatcggtcaaggcgaggatctcc
gacattcttgattccgtgtatgaacgcgaccacgtaagagccgatatttcaggcgtttcc
ggcaagggcttcgccgatggcggtcatctggtcggcaacaatctccaggcccatctcaac
gcgctggaaaaatccatgcgcgacgccgcagcggacctcgactttgaaaaggcagcccgt
ctgcgcgacgaaatcaaacgcctcaaggcagccgaacttgccaccatggacgaccccatg
gccaaggaagaagcacgtgcggtcgaaggcggcgggaaaaacaacagacggagccacttg
tcgatttcctcccctgagggggagacagccggcagggcagacggggatgccgcttccacg
aacgaaagcgggaagtctctcttcgccaaaccttcgctggacgagatgggtccgggctcc
gacgcaggaaaaccgcttttccgcaagaacacgctggacgagatgaccgtgggtcggacc
gaaaagcccgtgaggggcgcggtgcccgataagcccgcgaccgaacccggcaagaggttc
tccccgctgctggaaggccagcccgaacgcgccgcagacgatctgcggccgctggtccgt
ggtaagatcggcgccggttcctatgaagatgccggagagcagaagcgcaaaagcaggacc
aagggcaagactggccgtccgggccgctga
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