Agrobacterium sp. 33MFTa1.1: EYD00_09315
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Entry
EYD00_09315 CDS
T05906
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYD00_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agt03019
]
EYD00_09315
Enzymes [BR:
agt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EYD00_09315
Messenger RNA biogenesis [BR:
agt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EYD00_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QBJ13569
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All DBs
Position
circular:complement(1832761..1834017)
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AA seq
418 aa
AA seq
DB search
MNSLAGQDWFEKPALKRIFALLNADGGEVRIVGGAVRNALMGLPVVDIDMATTLTPDVVV
ARAKAAGIKAVPTGIEHGTVTLVIDGEGFEVTTLRRDVETNGRHAQVAFGTDWQTDAERR
DLTINALYADEKGEIIDLIYGLPDIETGTVRFIGDAATRISEDYLRILRFFRFFAHYGSG
RPDADGLRASARAKDRLATLSAERVWSELKKLLSARDPSRALLWMRQSGVLTEILPETEK
WGIDAIHGLVATEQALGWAVDPMLRLAAIVPPDGERMASLAARLRLSKAEAAYLAHWAAA
PPADPELKETALDRLLYRQGVEGVKTRLKLALSSARADISAGETAMQKAARFSTLLARAE
KFQKPGFPLSGADVMAAGVAAGPQVGEVLKSLEEKWIDVNFSLDRAALTARLKEMLQN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccttgccggccaggactggttcgaaaaaccggcactgaagcgcattttcgcg
cttttgaatgccgatggcggcgaggtgcggatcgtcggcggcgcggtgcgcaacgcgctg
atgggcctgccggtggtcgatatcgacatggccacgacgctgacccctgacgtggttgtt
gcgcgggccaaggccgcgggcatcaaggcggtgccaacaggcatcgagcatggcacggta
acgctggtcatcgacggtgaaggtttcgaggtgacgacgctgcgccgcgatgtggagacc
aatggccgccacgcacaggtggccttcggcaccgactggcagaccgatgccgagcggcgc
gatctcaccatcaatgctctttatgccgatgaaaagggcgagatcatcgaccttatctac
gggttgcccgatatcgaaaccggaaccgtgcgcttcatcggcgatgcggcgacgcgaatt
tcggaagattatctgcggattctccgctttttccgcttttttgcccattatggctctggc
cgcccggatgcagatggcttgcgagccagcgcacgggccaaggacaggctggcgacgctt
tcggccgagcgggtgtggagcgagttgaaaaagctgctttcggcccgcgatccttcccgc
gccctgctctggatgcggcaatcgggcgttctaacggaaattcttcccgaaaccgagaaa
tgggggatcgacgccattcacggtctggtcgcgacggagcaggctcttggctgggcggtg
gatccaatgctgcggcttgccgcgatcgtgccgccggatggcgagaggatggcctctctg
gccgcgcggctgaggctgtcgaaggcagaagctgcctaccttgcccattgggccgcggcc
ccgccggcagatcccgaactgaaggagacggcgctcgaccggctgctttatcgtcaaggt
gttgaaggcgtgaagacgcggctgaaactcgcgctttcctccgctcgtgccgatatttcg
gccggcgagacagccatgcagaaggctgcgcggttttcgacactgctggcgagggcggag
aaattccagaagcccggatttccgttaagcggtgcagacgtgatggcagcgggcgtcgcg
gccggtccgcaggtcggcgaggtgctgaaaagccttgaggaaaagtggatcgacgtcaat
ttctcgcttgaccgggcagcgttgaccgcccggcttaaagagatgcttcagaactga
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