Agrobacterium sp. 33MFTa1.1: EYD00_10255
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Entry
EYD00_10255 CDS
T05906
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agt03021
]
EYD00_10255 (rpoH)
Transcription machinery [BR:
agt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYD00_10255 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QBJ13737
LinkDB
All DBs
Position
circular:2020139..2021041
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AA seq
300 aa
AA seq
DB search
MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHDSQEDVLIEQDELETRRRMLAKAMGVLNDRER
RIFEARRLAEEPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacgattacagccggcgaagccggtctcaatagatatctc
gacgaaatccgcaaatttccgatgctggagccgcaggaagagtacatgcttggcaagcgt
tacgccgagcatggcgaccgcgacgccgcccacaagctcgtcaccagccacctgcgtctc
gttgccaagatcgccatgggttaccgtggttacggcctgccgatcggcgaagtcgtttcc
gaagggaatgtcggcctgatgcaggcggtgaagaaattcgatccggaacgcggattccgt
ctggccacctatgcaatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcacaaccgccaaccagaagcgtctgttcttcaacctgcgc
cgtctgaagggccgcatccaggccatcgacgatggcgacctgaagccggagcatgtcaag
gaaatcgcgacgaagctgcaggtgtcggaagaagaagtcatctcgatgaaccgccgcctg
catggcgacgcatcgctgaatgcgccgatcaaggcgtccgaaggcgagtccggccaatgg
caggactggctggtggatgaccatgacagccaggaagacgtgctgatcgagcaggacgaa
ctggaaacccgccgccgcatgctggcgaaagccatgggcgtgctgaacgaccgcgaacgc
cgcatcttcgaggcccgcagacttgccgaggagccggtgacgctggaagaactctcctca
gagttcgacatcagccgcgagcgcgttcgccagatcgaagtccgtgcctttgagaaggtg
caggaagcggtgcagaaggaagcgctggaagcggcgcgcgccctgcgcgtggtggatgcg
taa
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