Agrobacterium sp. 33MFTa1.1: EYD00_11270
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Entry
EYD00_11270 CDS
T05906
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00020
Citrate cycle (TCA cycle)
agt00640
Propanoate metabolism
agt00660
C5-Branched dibasic acid metabolism
agt00720
Other carbon fixation pathways
agt01100
Metabolic pathways
agt01110
Biosynthesis of secondary metabolites
agt01120
Microbial metabolism in diverse environments
agt01200
Carbon metabolism
Module
agt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EYD00_11270
00640 Propanoate metabolism
EYD00_11270
00660 C5-Branched dibasic acid metabolism
EYD00_11270
09102 Energy metabolism
00720 Other carbon fixation pathways
EYD00_11270
Enzymes [BR:
agt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EYD00_11270
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
DUF6224
Motif
Other DBs
NCBI-ProteinID:
QBJ13917
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Position
circular:complement(2242310..2243503)
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AA seq
397 aa
AA seq
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MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK
ELGPDAKGGVRLAKSIEEVVSHAKDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC
SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAINPEKGVSDADVAAISKALELD
GVAAEDAKSLFPILYKAFSEKDMALLEINPLIVMENGHLRVLDAKVSFDGNAMFRHDDVK
ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG
GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLQVPLVVRLE
GTNVELGKKLLNESGLAITAADDLDDAAKKIVAAING
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcacgaatatcaggccaaggctcttctgaagggctacggcgcgccggttgcc
gaaggcgttgccattctcaaggtcgaagaagccgaagctgccgcaaagcagcttccgggc
ccgctctatgtcgtcaagagccagatccatgctggcggccgcggcaagggcaagttcaag
gaactcggcccggacgccaagggcggcgttcgtctggccaagtccattgaagaagtcgtt
tcccacgccaaggacatgctcggcaacacgctggtaacggcgcagacgggcgatgccggc
aagcaggtcaaccgtctctatatcgaagacggcgctgatatcgctcgcgaactctattgc
tcgctgttggtagaccgttcggtcggccaggttgccttcgtggtttccactgaaggcggc
atggacatcgaagccgtcgcccacgacacgcctgaaaagatccacaccatcgccatcaac
cctgaaaagggcgtttccgatgccgacgttgctgcgatctccaaggcgcttgagcttgac
ggcgttgcagccgaagatgccaagtcgctcttcccgatcctttacaaggccttcagcgag
aaggacatggctctcctcgagatcaacccgctgatcgtcatggaaaatggccatctgcgc
gttctcgacgccaaagtttccttcgatggcaacgccatgttccgccatgacgacgtcaag
gcgctgcgcgacgaaaccgaagaagacgccaaggaaatcgaagcctccaagtgggacctc
gcttacgtcgccctcgacggcaacatcggctgcatggtcaacggcgctggccttgccatg
gcgacgatggacatcatcaagctttacggcaaagagccggcaaacttctgcgacgtcggc
ggcggcgccggcaaggagaaggttgcggcagctttcaagatcatcactgccgacccgaag
gtcgagggcatcctcgtcaacatcttcggtggcatcatgaagtgcgatgtcattgccgag
ggcgttatcgccgcggtgaaggaagtcggtctgcaggttccgctcgttgttcgccttgaa
ggcaccaatgtcgaacttggcaagaagcttctgaacgaatcgggccttgcgattacggct
gctgacgatctggacgacgcagccaagaagatcgtcgcggcgatcaacggctaa
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