Agrobacterium sp. 33MFTa1.1: EYD00_12675
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Entry
EYD00_12675 CDS
T05906
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agt03016
]
EYD00_12675 (truB)
Enzymes [BR:
agt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EYD00_12675 (truB)
Transfer RNA biogenesis [BR:
agt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EYD00_12675 (truB)
Prokaryotic type
EYD00_12675 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QBJ14165
LinkDB
All DBs
Position
circular:complement(2544467..2545414)
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AA seq
315 aa
AA seq
DB search
MSKPRKQQNRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEQRTTDDLEGEVVESSDQRPDEQAIRDLLPN
YTGVIMQTPPQFSAIKIAGERAYDLARDGETVEIPAREVEIHRLTLLACPDADTAHFEVE
CGKGTYVRALARDMGRDLGCFGHISELRRTMVAPFGEDMMVPLETLTALEAVEDRDERLE
ALDAYLIDTAEALSALPRLIINDDQAHRLKMGNPILLRGRDAPASHPEAYATAHGKLVAI
GEIGEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcagaaccgcaaacccaagggccgtccgatttccggttgg
ctgatcctcgacaagccgctcgatttcggctctaccgaggccgtctccaagatcaagtgg
ctgttcaatgcccagaaggcaggccatgccggcacgcttgatccgctggcctccggcatg
ttgccgatcgcgcttggtgacgccaccaagaccgtgccttacgtcatggacggccggaaa
atctacgaattcacagtgacctggggcgagcagcgcacgaccgacgatctggaaggcgaa
gtggtcgaatcttccgatcagcgcccggacgagcaggcgatccgcgatcttctgcccaat
tataccggcgtgatcatgcagaccccgccgcaattctccgctatcaagatcgccggtgaa
cgcgcttatgatctggcacgtgacggcgagaccgtggaaattcccgcacgcgaggtggaa
atccatcgcttgacgttgctggcctgcccggatgccgatacggcccatttcgaagtggaa
tgtggcaaaggcacttatgtgcgggcgcttgcgcgtgacatgggccgcgatctcggctgt
ttcggccatatctcggaactgcgccgcaccatggtcgctccattcggtgaagacatgatg
gtgccgctcgaaacgctcaccgcgctggaagccgttgaagaccgcgacgagcggctggaa
gcgctggacgcctatctgatcgacacggccgaagcgctttccgcccttccccgccttatt
atcaacgacgaccaggcgcaccggctgaagatgggcaaccctatcctgctgcgcgggcgc
gatgcgccggccagccatccggaagcctacgctacggcgcatggcaagctggtcgccatt
ggcgaaatcggcgaaggcgagtttcgcccgaagagggttttcggctga
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