Agrobacterium sp. 33MFTa1.1: EYD00_13960
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Entry
EYD00_13960 CDS
T05906
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_13960 (vsr)
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
EYD00_13960 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QBJ14621
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All DBs
Position
linear:complement(33613..34071)
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AA seq
152 aa
AA seq
DB search
MADIVPAHVRSRMMSGIRGKDTKPELLVRRALHAAGFRYRLHERTLPGKPDMVFPKYSAV
VFIHGCFWHGHDCHLFRMPSTRTEFWQAKISGNVARDVRAITRLRETGWRVGTVWECALK
GREKLKVDDIAATLAVWLRGKAPQLEIRGLAA
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatcgttcctgcccatgtccgcagccggatgatgtccggcatccgcggcaag
gacacgaagccggaactgcttgtgcgcagggccctgcacgcggccggctttcgatacagg
ctgcatgagcgcactttgcccggaaaaccggatatggtgtttccgaaatattccgccgtg
gtctttatccatggctgcttctggcatggccatgactgccatctcttccggatgccctcg
acgcggacggaattctggcaggccaagatctctggaaatgtggcgcgtgatgtgagggcg
atcacccgtcttcgggagaccggctggcgtgtcggtaccgtgtgggagtgcgcgctcaag
ggcagggagaagttgaaggttgatgatattgctgcaactcttgccgtatggctgcgcggt
aaagctcctcaactggaaatccggggcctcgcagcatga
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