Agrobacterium sp. 33MFTa1.1: EYD00_14165
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Entry
EYD00_14165 CDS
T05906
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03030
DNA replication
agt03430
Mismatch repair
agt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYD00_14165
03430 Mismatch repair
EYD00_14165
03440 Homologous recombination
EYD00_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agt03032
]
EYD00_14165
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_14165
Enzymes [BR:
agt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYD00_14165
DNA replication proteins [BR:
agt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYD00_14165
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYD00_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QBJ14658
LinkDB
All DBs
Position
linear:complement(73101..74084)
Genome browser
AA seq
327 aa
AA seq
DB search
MTSQLDFFASAAARLPETERGRKMPGRGAVQRVAMDDEGLAGYLESTGNYRVLRKLMPRQ
VVERPRPEFSRRGVILDTETTGLNHRTDEIIEIGVIAFTFDDQGAIGDVTGIYGGLRQPN
VAIPAEITRLTGITDDMVAGQAIDMERLTFLVGDADLIIAHNAGFDRPFCEAFSPIFNEK
AWACSVSEIDWRVRGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQNRPGQEGMTP
FMELHAASRRSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWAELPEEMLAEELH
FLRTEIYRWDADPTVKYLTAFDRFKAG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagttggactttttcgcttccgcggccgcgcggcttcccgagaccgaacgg
gggcgaaaaatgccgggacgcggagcggtgcagagggtcgcaatggatgatgaggggctg
gcgggctatctcgaatccaccggcaattaccgcgttctgcgcaagctcatgccgcgtcag
gtcgtggaacggccaaggccggaattttcccgccggggcgtgatcctcgacacggaaacc
acgggtctgaaccaccggacggacgaaataatcgagatcggcgtcatcgccttcacgttc
gacgatcagggcgccattggcgacgtcaccggcatttacggcggacttcggcagcccaac
gtcgccataccggcggagatcacccggctgactgggatcaccgatgacatggttgcgggg
caggcgatcgacatggagcggctgacttttctcgtcggcgatgctgatctgatcattgcc
cacaatgccggcttcgaccgtcccttctgtgaagccttctcgcccatattcaatgagaag
gcctgggcctgctccgtttccgaaatcgactggcgggtgcgtggatttgagggcaacaag
ctgggttatctgatcggtcagtccggttatttccatgatggtcatcgcgccgttgatgat
tgcttcgcgctgctggaggtgctcgagcagaaccggccgggccaggaaggcatgacgccc
ttcatggagcttcacgcggctagccgtagatcgcgcgtccggatctacgcggagaacagc
cccttcgatatgaaggatcacctgaagaagcggggttatcgctggtcggacggttcggac
ggccggccgaaatcctggtgggcggagctgccggaagagatgctggcggaggagctgcat
tttctgcgcaccgaaatctatcgttgggacgccgaccctacggtcaaatatctcacggct
ttcgaccggttcaaggccgggtag
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