Agrobacterium sp. 33MFTa1.1: EYD00_15340
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Entry
EYD00_15340 CDS
T05906
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYD00_15340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_15340
Transporters [BR:
agt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EYD00_15340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
LytR_C
Motif
Other DBs
NCBI-ProteinID:
QBJ14872
LinkDB
All DBs
Position
linear:complement(319584..321224)
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AA seq
546 aa
AA seq
DB search
MIKSLNKSMRILSTSAALSLMMLSAPHAFAATPADTLVEGFAIDDIITLDPGEAFELSAA
EVTGNTYSKLVSIDLNDTSKVVGDLAESWTTSEDGLTYTFKLKSGLKFASGNPVTADDVA
FSFERAVKLDKSPAFLLTQFGLKGDNVTEKAKATDANTFVLTVDKPYAPSFVLNVLTATV
ASVVDKKLITEKAKSVTPSADYKYDTDFGNEFLKTGYAGSGPYKILGWKANEAVILEANP
NYYGEKPKLKRVVYRHMKESSGQRLALENGDIDVARNLEPGDMEAVSKKEGLAVTSAPKG
TVYYFSLNQKNENLKKPEVIEAFKYLVDYDAIGATIIKGIGEVHQTFLPKGQLGALDENP
YKLDVAKAKELLAKAGLKDGFTVTMDVRNTQPVTGIAESVQQTLAQAGIKLEIIPGDGKQ
TLTKYRARTHDIYIGQWGSDYFDPNSNAETFTINYDNSDEGKNKTLAWRNAWDVPDLTKE
TQSALLEKDSAKRAAIYENLQKEVLAKGPFVIIFQQTEVAGYSAKLKGLKLGPSFDTNYV
YPISKE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcgctcaacaaatccatgcgtatcctcagcaccagcgctgccctgtcgctg
atgatgctgtctgccccgcatgcttttgccgccacgccggccgatacgctggtggaaggt
ttcgccatcgacgacatcatcacgctcgatccgggtgaggctttcgaactgtctgccgcc
gaagtcaccggcaacacctatagcaagctcgtttccatcgatctcaacgacacgtccaag
gttgtcggtgatctcgccgaaagctggacgacctccgaggatggcttgacctatacgttc
aagctgaaatccggcctgaaattcgcctccggcaatcctgtcaccgctgatgacgttgcc
ttctccttcgaacgcgccgtcaagctcgacaagtcgccggcattcctgttgacgcagttc
ggcctgaagggcgacaacgttaccgaaaaggcgaaggcaacggacgcgaacaccttcgta
ctgaccgtcgacaagccctatgcgccgagcttcgtgctgaacgtgctcaccgcaaccgtc
gcttcggtggtggacaagaagctcatcaccgaaaaggcgaagtcggtcacaccgagcgcc
gattacaaatacgacacggatttcggcaacgagttcctgaagaccggttatgccggttcc
ggcccttacaagatccttggctggaaggccaacgaagccgtgattctggaggccaacccg
aactattacggtgagaagccgaagctgaagcgggtcgtctatcgtcacatgaaggaaagc
tccggccagcgtctggcgcttgaaaacggcgatatcgatgttgcccgtaaccttgagccc
ggcgatatggaagccgtttccaagaaggaaggccttgccgttacctccgcgcccaagggc
accgtttattatttcagcctcaaccagaagaacgagaacctgaagaagcctgaggtcatc
gaagcgttcaaatatctcgtcgattatgacgcgatcggcgcgacgatcatcaagggcatt
ggcgaagtccatcagaccttcctgccgaagggccagcttggtgcgcttgatgagaacccc
tacaagcttgacgtcgccaaggccaaggaacttctcgccaaggccggtctgaaggacggc
ttcaccgtcaccatggatgtgcgcaacacccagccggtgacgggcattgccgaaagcgtg
cagcagacgctggcacaggccggcatcaagctcgaaatcatccccggcgacggtaagcag
acgctgaccaaatatcgcgcccgcacgcatgatatctacatcggccagtggggttcggac
tatttcgacccgaactcgaatgcggaaaccttcaccatcaactacgacaattcggatgaa
ggcaagaacaagacgctggcctggcgcaatgcctgggatgttcctgatctgaccaaggaa
acccagtctgctctcttggaaaaggacagcgccaagcgcgccgccatctatgaaaacctg
cagaaggaagttctggcgaagggtcccttcgtcatcatcttccagcagacggaagtggcc
ggttattccgccaagctcaagggcctgaagctcggaccgagctttgacaccaactatgtc
tatccgatctccaaggaatga
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