Agrobacterium sp. 33MFTa1.1: EYD00_15390
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Entry
EYD00_15390 CDS
T05906
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYD00_15390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_15390
Transporters [BR:
agt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EYD00_15390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
TcdA1_RBD_3
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
QBJ14882
LinkDB
All DBs
Position
linear:complement(331113..332135)
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AA seq
340 aa
AA seq
DB search
MKKIILASGAALMLTMGAAEAQDKTLTISVYAFAQDEFKELVYTPFEQKCGCKLVVETGN
SVERLAKMEANKASPVVDVAIVSMADALSATRKDLIQKIDASRVPNIEKLYDIAKDPNGD
GMSVGVNFYATSIVYRTDKMKIDSWADLLKDGIVDHVAFPNVTTNQGPPALYMLGKAIGK
DTPDLAGAIEAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWAPFTKLDLPLAW
ATPKEGQTGGMNVLVVPKGTKNEDLALQFMDFWLSTDVQKALAEKLVDSPTNREVKVSDE
VANNITYGDETARSLQLIPSDVTLDNRDKWLSEWNAKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcattctcgcatcgggcgccgccctgatgctgacgatgggagccgctgag
gcccaggacaagacgttgacgatctcggtctacgccttcgcgcaggatgaattcaaggaa
ctggtctatacgcccttcgagcagaaatgcggctgcaagctcgtcgtcgagaccggcaac
agcgtcgagcgtctggccaagatggaggccaacaaggccagcccggtcgtcgatgtcgcc
atcgtctccatggccgatgcgctgtcggccacccgcaaggacctgatccagaagatcgat
gcttccagggttccgaatattgaaaagctctatgacatcgccaaggacccgaatggcgat
ggcatgagcgtcggcgtcaatttctacgccacgtcgattgtctaccgcaccgacaagatg
aagatcgacagctgggccgatcttttgaaggacggtatcgtcgaccacgtcgccttcccg
aatgtcaccaccaaccagggcccgccggcgctttacatgctgggcaaggccatcggcaag
gacacgcccgatcttgccggcgccatcgaggccgtgggcgaaaagaaggacgatatcgtc
accttctacgtcaagtcctcgcagctggtgcagctcatgcagcaggaggaaatctgggca
gcgccgatcggccgcttctcctgggcgcctttcaccaagctcgacctgccgctcgcctgg
gcaacgcccaaggaaggccaaaccggcggcatgaacgtgctcgttgtaccgaagggcacg
aagaacgaggaccttgcgctgcaattcatggatttctggctctcgaccgacgtccagaag
gcgctggcggaaaagctggtggacagcccgaccaacagggaagtcaaggtttccgacgag
gtggcgaacaacatcacctatggcgatgaaaccgcccgcagcctgcagctcattccttcc
gacgtaacgctcgataaccgcgacaagtggctgtcggagtggaacgccaaggtggggcag
taa
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