Agrobacterium sp. 33MFTa1.1: EYD00_15650
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Entry
EYD00_15650 CDS
T05906
Name
(GenBank) tandem-95 repeat protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
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Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Big_9
Cadherin_5
Cadherin_4
Metallophos
HCBP_related
Cadherin_3
CshA_repeat
He_PIG
Motif
Other DBs
NCBI-ProteinID:
QBJ16300
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Position
linear:complement(398335..404178)
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AA seq
1947 aa
AA seq
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MLVSPGGTGTVTSYSLVYDVYFPSGGSTEWIPFLQTDLTNSNDGDIFGSASSASYGIGIG
GNYRGTAKLDAWNRVGVTIEKNSNGTVSMNKYVNGDYIATQQISSNPGRFAIDLSKGFLI
FSDEDGDTSPGYLSNFLFLQKVLTKAEMSYLGAAKASGILPDVMKQAAEQTGALEVRFSE
GSAAPAIGTGTITAKGTTLEFTTPAKANVLGIGETAPVDPSAVAKTAMIKDMMVTPDAAN
VTIDLSKYFSGEKLTFTVQNSENKVVNAVLAEGNKLTLDFAELGHSDIRVTATDAAGKSM
ADDFRVRVAGPNAYTIAVFPDTQDYTSNDGIKHLFGDMTQWLVDNRQSHNIVFMSHVGDI
TQNNQSSEWDIAEAALRKLDGKLPYALLPGNHDQGSSGNAANHSSDQLDSRFSAAKQAAT
NAGTFGGAYDQEQAAARNTYSTFTAPDGTKWLSISLEFGPRDDVIRWAGDVIEKFPDHRV
MLATHSLTSYAGRQDNLALPLYDEGAGYDYGMRTDQRGANDGEYVARVLLSRYPNIVMTF
SGHIFGDGAETDITYNQYGEPVFQFLVNYQNGVSREITGNGIESRGNNGGNGAIRLITID
PDNNRISTETYFTAFDDYLDGYRSKPEIDRNGLTGYYRGHQEVFENVYVGAGKARAMADA
GDDIVASAATGASKASVNLSAAKSLLSADIKKFVWTDKNGDVVAEGKEAVADLSLGRHKL
TLTATDANGVKTTDKIDVLVRGDRTLLVENFNDGKADGWATNFGATDGNTGNFLLKGTVF
SRSSTTDGLAAPEAALFDQSDATGNKLVYIGGQSAGWSDYVLEATLIQLDNDAIGVYFYY
KDANNYYRFSMDGETNRRQLIKVSGGNEVLLASVNEGVQYNMELPLTVSVVGGVINVFLG
DKNVFGGPVVDATSPLSGGTVGVYSSGQRASVFDDIVVTRAVTTAKAGIDQRVYDLDGDG
KASVTLDASGSFGPEHLTGFVWTDLDGNVVATGKKVDVALDTGINRLILKVTSANGAVST
DRVDVTVVEKAKILVAEDFSSAEAMARFKIVDEGEFGGIGPDGKSSEWLISNGRLVQTTE
LASRELTWSGATNSDYWKRGWSPMGDGVNVLRLGTYALFNDPAALAWTDYAIETTFQTPD
KDGLGFLFRYKDSKNYYKLELDADGILDRTPSNGAGSIFNLVRMRNGIEEILAQVPGKYE
PGQDTKLRVEVIGDKITAFLNEEALFAYPIGDRELDAGTFGLYSWGNKGLAFDNLTVVNL
KSGLEAGTTINGTEARDTLVGTDADETIFGHGGDDRLIGNAGNDRLAGGDGNDVLMGGAG
RDALSGGNGDDVLFGNEGNDIVSGGLGDDVIEGGTGNDLLLGGDGSDTYVYGRGDGSDDI
VETSGATGDKDILVLHDIARNEAVLHKFGDNVEIEFGNGEKISLRNQLAGGGVELVTFAD
GTLLNRDAIVKGLVNRGPVAAADTLAAVDEDAASFLISFATLLANDKDADLDQLAVTGVS
LVAGGTAVMEENGIRFTTAADFNGTASFSYRITDGRGGSSEATASFTVKPVNDAPVAASI
AVKTDEDVVLKGKVVASDIDGDTLTFAIKADAGAAKGEVKIDAATGEWVYAPNANVNGTD
SFTVVVSDGRGGSAESVVSVTINPVNDAPVAVDDRITVSEKDNASFDLVANDTDVEGDRL
TLVSVAVAGVAGLALTSEQAAAAFSVVDGKLVVDPSSACAALEDDQQAVVTLTYTVRDAN
GGEAHGTTTVTVNGYTEYTIVSGTDGNDVLVAGDGKDMLEGGDGNDTLLAGAGNDMVDAG
AGNDRVVAGDGNDIVEGGAGNDVLMGGAGNDVLHGGAGNDQLNGGSGDDTLIGGAGNDVL
TGGSGADTFVFAAGSGRDVVTDFQAGADGKDVVELSKDVFADYQAFIASGVFTDGDHGAE
IAFKDGSTITFDGVKTEQFVIDDFRFA
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
attctcgtttcgcccggtggcaccggcacggtaacgtcctacagcttggtatatgacgtc
tatttcccttcgggcggctccaccgaatggatacccttccttcagacggatcttaccaac
agcaacgacggtgacatttttggctctgcaagcagtgccagctacggtatcggcatcggc
ggtaattatcgcggcacggccaaactggatgcctggaaccgtgttggtgtcacgatcgaa
aagaattcgaacggcaccgtttcgatgaataaatacgtcaatggcgactatatcgcgacc
cagcagatatcgtccaatccgggacgcttcgccatcgacctgtccaaaggcttcctgatc
ttctcggatgaggatggcgatacatctcccggctatctcagcaatttcctctttctccag
aaagtgctgacgaaggccgaaatgtcctatctgggcgcagcaaaagcatcgggtattctg
ccggatgtaatgaagcaggcggcagagcagacaggcgctctcgaagtccgtttctcggaa
ggctcggccgcacccgcaatcggcacgggaacgattaccgcaaagggcaccacgctcgaa
ttcacgacgcctgcaaaggctaacgtccttggaattggcgagacggcccctgtcgatccg
tcggccgtggcaaaaaccgccatgatcaaggacatgatggtgacgcccgacgcggcaaac
gtgacgatcgatctgtcgaagtacttctccggcgaaaagcttaccttcaccgtgcagaac
agcgaaaacaaggtcgtgaatgcggtccttgcggaaggcaacaagctgacgcttgacttt
gccgaactcggccattccgacattcgtgtgaccgcgacggacgctgccggcaaaagcatg
gccgacgactttcgtgtgcgtgtggccggcccgaacgcctatacgatcgcggtttttcca
gacacgcaggactatacctcgaacgatggcataaagcatctcttcggcgacatgacgcag
tggctggtcgataaccgccagagccacaacatcgtcttcatgagccatgtgggcgatatc
acccagaacaaccagtcgtccgaatgggatattgccgaagctgcgctgcgcaagctcgat
ggcaagctgccctatgcgctgcttcccggcaatcacgatcagggctcgtccggcaacgcc
gcaaaccattcttccgaccagctggacagccgtttctcggctgcaaagcaggcggcgacc
aatgccggcaccttcgggggcgcttacgatcaggaacaggccgccgcccgcaacacctac
agcaccttcaccgcgcctgatgggaccaagtggttgtccatttcgctcgaattcggcccg
cgcgacgacgtgatccgctgggcgggcgatgtgatcgagaagtttcccgaccatcgcgtg
atgctcgcaacgcattcgctgacgagctatgccggccgtcaggacaatctggccttgccg
ctctatgacgaaggcgccggctatgattatggcatgcgcaccgaccagcgcggcgcaaac
gacggcgaatatgtcgcccgcgtcttgttgtcccgttatccgaacatcgtcatgaccttc
tccggtcacatcttcggcgatggcgcagaaaccgacatcacctacaaccagtatggcgag
ccggtcttccagttcctggtcaactaccagaacggcgtatcccgcgaaatcaccggtaac
ggcatcgagtcgcgcggcaataacggcggcaacggcgcgatacgcctgatcaccatcgat
ccggacaataaccgcatctccaccgaaacctacttcaccgccttcgacgattacctcgac
ggttaccgcagcaagccggaaatcgatcgcaacggcctgaccggttattatcgcggtcat
caggaagtgttcgaaaacgtctatgtcggtgcaggcaaggcgcgcgccatggccgatgcc
ggtgacgacatcgtcgccagtgcggcaaccggtgcatcgaaggcaagcgttaacctctca
gcggccaaatcactgctgtcggcagacatcaagaaattcgtctggacggacaagaacggc
gatgtggttgccgaaggcaaggaagcggttgccgatctttcgctcggcaggcacaagctg
acgctgacggcaaccgacgccaacggcgtcaagaccaccgataagattgacgttctcgtt
cgcggcgaccgcaccctgctggttgaaaacttcaatgacggcaaggcggacggctgggcc
accaatttcggcgcgaccgatggcaacaccggcaacttcctgctcaagggcacggtattt
tcgcgctcgagcacaacggatggccttgccgctccggaggcagcgctcttcgaccagagc
gatgcgaccggcaacaagcttgtttatattggcgggcaatcggccggctggagcgactat
gtcctggaagcgacgctcatccagctcgataatgacgcaatcggcgtctacttctattac
aaggacgcgaacaactactaccgcttctcgatggatggggaaacgaaccgccgccagctg
atcaaggtttcgggcggcaatgaagttctgctcgcttcggtcaatgagggcgtccagtat
aatatggagcttccgctgaccgtctcggtcgtcggcggcgtcatcaacgtcttcctgggt
gacaagaacgtcttcggcggccccgtcgtggatgcgacgtcgccgctctccggcggcacg
gttggcgtctattccagcggtcagcgcgcctcggttttcgatgacatcgtcgtcacacgc
gcggtcacgaccgccaaggccgggatcgaccagcgggtctacgacctggatggcgatggc
aaggcttccgtcacgctcgatgcatccggctcctttggccctgagcatctgactggcttc
gtctggacggacctcgacggcaatgtcgtcgccacaggcaaaaaggtcgacgtcgcgctc
gataccggcatcaacaggctgatcctgaaggtcacctccgccaacggtgccgtttcgacc
gatcgcgttgatgttacggtcgtggagaaggcgaaaattctcgttgccgaggatttctcc
tccgctgaggccatggcgcgcttcaagattgttgacgagggtgagttcggcggtatcgga
ccggatggaaagtcctctgagtggctgatttccaacggcaggctggttcagacaaccgag
cttgcaagccgtgagctgacctggagcggcgcaaccaactccgactactggaagcgtggc
tggagcccgatgggggacggcgtcaacgtgctgcgccttggcacttatgcgctcttcaac
gacccggcagcgctggcatggaccgactacgccatcgaaacaacgttccagacacctgac
aaggacggtctcggcttcctgttccgctacaaggacagcaaaaactattacaagctcgaa
ctggatgccgacggcattcttgatcgtaccccgagcaatggcgccggcagcatcttcaat
ctcgtccggatgcgaaacggcatcgaggaaatcctcgctcaggtgccaggcaaatatgag
cctggccaggatacgaagctgcgcgtcgaggtcatcggcgacaagatcaccgctttcctc
aacgaagaggcgctgtttgcctatcccatcggtgatcgcgaactcgacgcgggtactttc
ggcctctattcctggggtaataagggtctggccttcgacaatctgacggtggtcaatctg
aaatccggcctcgaggcgggcacaaccatcaacggcacggaagcgcgcgacaccctcgtg
ggtacagatgccgatgaaacgatcttcggccacgggggcgatgaccggttgatcggcaac
gccggcaacgaccgcctggccggcggcgatggcaacgacgtgctgatgggcggggcaggg
cgtgacgcgctgtccggcggcaacggtgacgacgtgctgtttggcaatgagggcaacgat
atcgtctccggcggtctgggtgacgacgtcatcgaaggcggtaccggcaacgatctgctg
ctgggcggtgatggctccgacacctatgtctatggccgcggtgacggctccgacgacatc
gtcgagacctctggcgcaacgggcgacaaggacattctcgttctgcacgatattgccaga
aacgaagccgtcctgcacaagttcggcgacaacgtcgaaatcgaattcggcaacggtgaa
aaaatctcgctgcgcaaccagctcgctggcggcggtgtggaactggtgaccttcgccgac
ggaacgcttctcaaccgcgatgcgatcgtcaagggtcttgtcaaccgtggcccggttgct
gctgccgatacgctggctgcagtcgatgaagatgcggcatccttccttatttccttcgcc
acattgctggcgaatgacaaggacgccgatctcgaccagctggcggtgacgggtgtctcc
cttgtcgcgggtggaacagcggttatggaggaaaacggcatccgcttcaccacggctgcc
gatttcaacggcacggcgtccttcagctacaggatcactgacggtcgcggcggttcgagc
gaggcgacggcaagcttcaccgtcaagcctgtcaatgacgcacctgttgccgcctccatc
gccgtcaaaacggatgaggatgttgtcctgaagggcaaggtcgttgcatccgatatcgat
ggcgatacgctgaccttcgccatcaaggccgatgccggcgcggcgaagggcgaagtcaag
atcgacgcggcgaccggtgagtgggtctatgcgccgaacgccaatgtgaatggaaccgac
agcttcacggttgtcgtttccgatggcaggggcggcagtgccgagagcgtcgtctccgtg
acgatcaatcccgtcaacgatgcgcccgtggccgtagacgacaggatcaccgtatcggaa
aaggataacgccagcttcgatctggtcgccaatgatacggatgtggagggtgaccgcctg
acgctcgtcagcgtcgcagtggcaggcgtcgcgggccttgccctgaccagcgaacaggca
gctgctgccttctccgtggtcgatggcaagctggttgttgatccttcctctgcctgtgcg
gccctggaagatgaccagcaggcggtcgtgacgctcacctatacggtccgcgacgccaat
ggcggcgaagcgcacggcaccacaaccgtgactgtgaacggctacaccgaatacaccatc
gtcagcggtactgacggtaacgacgtcctggtggctggcgatggcaaggacatgctggaa
ggtggtgacggcaacgacacgctgctggccggtgccggcaacgacatggtggatgcgggc
gccggcaacgaccgtgtggttgctggtgacggcaacgatatcgtcgagggcggcgccggt
aacgacgtgctgatgggcggcgccggcaatgatgttcttcacggcggtgctggcaacgac
cagctgaacggcggatcgggcgatgacacgctgatcggcggggcgggcaacgatgtgctg
accggtggcagtggtgcggataccttcgttttcgcggccggcagcggccgggatgtcgtg
acggacttccaggccggcgctgacggcaaggatgtcgtcgaactctcgaaggacgtcttt
gcggattaccaggcgtttatcgcctccggggtcttcacggatggcgaccacggtgccgag
atcgccttcaaggacgggtcgacgattaccttcgatggtgtgaagaccgagcaattcgtc
atcgacgacttccgcttcgcgtaa
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