Agrobacterium sp. 33MFTa1.1: EYD00_16560
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Entry
EYD00_16560 CDS
T05906
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agt03009
]
EYD00_16560
Ribosome biogenesis [BR:
agt03009
]
Prokaryotic type
ribosomal protein modification factors
EYD00_16560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QBJ15100
LinkDB
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Position
linear:599083..600282
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AA seq
399 aa
AA seq
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MSATTDKGDADASIFDPELLRRFGITRVGDVTGLDIVGVPVWFAVRPNSRGLSVSQGKGL
VPAQARLSAVMEALEGAVAEDTRRHTAAFGSIQDMRDRGFPLIPFESVGRVDMDMLDPQR
ERAWVKGTSVRRQQEIYAPFELIGMDFRADFPWDRQAFLMSSQGLAAGFNHDHAVLHALQ
ELIENDACFLVDAFETRAVSPRPILFPPGVETSFDRLVRHLSDIGLPPSFFDMTNALGVP
VVMASLPRSLQAQDGPATRSAAGAACRPDVYDAALAALLEAVQSRLTDISGARDDLSPLR
YRRDGVASKPVAPGANQAEQAPGSLDLSRFETSLPPWRQLAEHLFARGIDDVHVFTLETG
LSGLHVVRVLASGLAPLSRGMQRLSQRTLEGFLKAGGTT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacaacggacaaaggtgatgcagacgcttccatcttcgatcccgagctgctc
cggcggttcgggattacccgtgtcggcgacgtgaccggcctcgatattgtcggcgtaccc
gtctggtttgcggttcgccccaattcgcgcggtttatcggtatcacagggcaagggactg
gttccggcccaggcgaggctctctgccgtgatggaggcgctcgaaggcgcggttgccgag
gatacccgcagacacacggccgctttcggctcaatccaggatatgcgcgacaggggtttt
cccttaatccccttcgagagcgttggcagggtcgatatggacatgctcgacccccagcgt
gaacgcgcgtgggtgaagggaacatcggttcgtcggcagcaggagatctacgctcccttt
gagctgatcggtatggattttcgagcggatttcccctgggaccggcaagcctttctcatg
agttcgcagggcctcgcagccggtttcaatcatgaccacgccgtcctccatgccctgcag
gaattgatcgaaaacgacgcctgctttctcgtggacgctttcgaaacccgcgccgtcagc
cccagaccgatcctgttcccaccgggcgtcgaaacatcattcgacaggcttgtccggcat
ctttcggacatcggtctgccgccctccttctttgacatgacaaatgcgctcggcgtgccg
gtggtgatggcaagcctgccgcggtcgcttcaagcgcaggatgggccggcgacccgcagc
gctgccggggcggcctgccgtcccgacgtttacgacgccgcgcttgctgcgctactggag
gcggtccagtcgcggttgacggatattagtggtgcccgcgacgatctctccccgcttcgt
tatcggcgtgacggggttgcttccaagcccgtggcccctggggcaaatcaggcagaacag
gcgccgggcagtctcgacttatcgcgtttcgaaacctctttgccgccatggcgccagctt
gcggaacacctttttgcgcgtggcatcgacgatgtccatgtttttacgctggaaacgggc
ctttccgggctgcacgtcgtgcgcgtcctggcaagcgggctggccccgctcagccgcgga
atgcaacgcctatcgcaacgaacgctcgagggttttctgaaggccggggggacgacatga
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