Agrobacterium sp. 33MFTa1.1: EYD00_16860
Help
Entry
EYD00_16860 CDS
T05906
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
agt
Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agt03036
]
EYD00_16860 (xerD)
Chromosome and associated proteins [BR:
agt03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EYD00_16860 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QBJ15157
LinkDB
All DBs
Position
linear:655673..656659
Genome browser
AA seq
328 aa
AA seq
DB search
MSGQPVAGRDSARLESFLEMMSAERGAAANTLASYERDLTDLREFLGSRRQSLTEAATSD
LSAYLTHLSAQGFAATSQARRLSSMRQFYRFLYSEGLRSDDPTGIIDAPKKGVALPKTMS
VADVNRLLGLAAQEAANEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFL
MIRGKGNKDRMVLLSRTAIEAMEKYEAARKALPSEKGKATKKAEATDSPWLFPSNSKEGY
LPRQVFARDLKDIAIRAGLHPSAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQ
IYTHVLEERLQELVQTHHPLAKQGKNLD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcaaccggtggcggggcgcgacagcgcgcggctggagagttttctggagatg
atgagcgccgagcggggtgcagccgccaacacgctcgcatcttacgagcgtgatctgacg
gacctgcgcgaattccttgggagccgccgccagtctctgacagaagccgccacatcggac
ctttccgcctatttgacccatctttccgcgcaaggcttcgctgcgacctcgcaggcgaga
cgcctctcatccatgcggcagttttatcgctttctttattcggaaggcctgcgcagtgac
gacccgaccggcatcatcgatgcgcccaagaagggcgttgccctgccgaaaacgatgagc
gtcgccgatgtaaaccgtctccttgggctcgcggcgcaggaagcggcaaacgaaggtccc
ggccagctcgcgcgcatccgcatgcatctgctgcttgagcttctttatgccaccggcatg
cgtgtcagcgaactcgtctcgcttccggtcaaagtgctgcgtcaggaaggacgtttcctg
atgatccgcggcaagggtaacaaggaccggatggttcttctttcccgaacggccatcgag
gccatggaaaaatatgaagccgcccgaaaggcgcttccctcagaaaaaggcaaggcaacg
aaaaaggccgaagcgacggatagcccgtggctcttcccatccaacagcaaggagggctat
ctgccccgtcaggtcttcgcccgcgacctcaaggacatcgccattcgggccgggctgcac
ccctcggcagtgtcaccgcatgtgctgcgccacgccttcgccagccacctcttgcagaac
ggtgcggatttgcgcgcggtgcaggaactgctcggccactccgacatttccacgacacaa
atctatacacatgtgctggaagaacgcttgcaagagctggtacaaacacatcaccccctt
gccaaacagggcaaaaaccttgattag
DBGET
integrated database retrieval system
