Agrobacterium sp. 33MFTa1.1: EYD00_20555
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Entry
EYD00_20555 CDS
T05906
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt02010
ABC transporters
agt02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EYD00_20555
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EYD00_20555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_20555
Transporters [BR:
agt02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
EYD00_20555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Glyco_hydro_3_C
SBP_bac_11
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QBJ15801
LinkDB
All DBs
Position
linear:1461775..1462686
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AA seq
303 aa
AA seq
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MKMKSKFLMATAAIAMMAAPALAQEKLKIGMTFQELNNPYFVSMQEALKEAAASIGADVV
VTDAGHDVAKQISDVEDMLQQKIDILLLNPTDSAGIEAAVHAAKAAGAIVVAVDANANGP
VDTFVGSKNRDAGYKSCKHLGDALGGKGEVAILDGIPVVPILQRVEGCKAALAEFPEIKL
VDTQNGRQDRSVALGVVENMIQSRPNLAGIFSVNDGGAMGALAAIQGSGKDIKLTSVDGA
PEAVKAIAEGGPFIETTAQFPRDQVRVGLAMALAQKWGARVVPKEVPIDVMVVDSKNAGE
FSW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaatccaagtttctgatggcgacagccgcaattgcaatgatggccgctccg
gcgctggcgcaggaaaagctgaagatcggcatgaccttccaggagctgaacaacccctat
ttcgtgtcgatgcaggaagcgctgaaggaagctgcggcaagcatcggcgctgacgttgtc
gtgaccgatgccggccacgacgtggccaagcagatttccgacgttgaagacatgcttcag
cagaagatcgacatcctgctcctcaacccgacggatagcgccggcatcgaagccgcggtg
cacgctgccaaggctgccggcgcaatcgtcgttgcagttgacgccaacgccaatggcccg
gtcgataccttcgtcggctcgaagaaccgtgacgcgggctacaagtcgtgcaagcatctc
ggtgacgcgctcggcggcaagggtgaagtcgcgatcctcgacggtatcccggtcgtgccg
atccttcagcgcgtcgaaggttgcaaggccgcactcgccgaattccccgagatcaagctg
gtcgatacacagaacggccgtcaggaccgctccgtcgctctgggcgtcgttgaaaacatg
atccagtcgcgtccgaacctcgccggtatcttctcggtgaatgatggcggtgcgatgggc
gctctggctgctattcagggttccggcaaggacatcaagctgacctcggtcgacggtgct
ccggaagctgtgaaggcgattgctgagggtggcccgttcatcgaaaccaccgcgcagttc
ccgcgtgaccaggtgcgtgtcggccttgccatggcgctcgcccagaagtggggcgctcgc
gtcgtgccgaaggaagtcccgatcgacgtcatggtcgtcgacagcaagaacgccggcgag
ttcagctggtaa
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