Agrobacterium sp. 33MFTa1.1: EYD00_22330
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Entry
EYD00_22330 CDS
T05906
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EYD00_22330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_22330
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EYD00_22330
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Ortholog
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GFIT
Motif
Pfam:
Ku
DUF5788
Motif
Other DBs
NCBI-ProteinID:
QBJ16107
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Position
linear:1871686..1872513
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AA seq
275 aa
AA seq
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MTRRASWKGHLVFGDLNCEIGLYSALTSSEKISFNIVNRKTGHRVERQYVDSDTGEAVER
DEQVKGYERDNGDYIVIEGDEISKLMPENDKVIRIRHFLQCDDIDKLFFDRSYYLAPTQE
GGEEALTLLARAMEDENVAALGEAVLFRRNRVVLIRPSGRALVATTLNFGYEVRAENTVF
KSIPDIEFDDEMLELAGHIIETRAGTFDPSDYSDRYNDALAELVKAKIEGREIRKRAPQK
HDNVIDLKEALRRSAREDAGKKAKPSGRKTSRKAS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggagggcaagctggaaaggccatttggtctttggtgatttgaattgtgaaatc
ggtctttattccgcgctcacctcgtcggagaaaatctcgttcaacatcgtcaaccgcaag
acggggcaccgcgtggagcggcaatatgtggatagtgataccggcgaggcggtcgaacgg
gacgagcaggtcaagggctacgaacgcgataatggcgattacatcgtcatcgagggtgac
gaaatctcaaagctgatgccggaaaatgacaaggtcatccgcatccggcatttcctccag
tgcgacgacatagacaagctcttcttcgataggtcctattatctagcgccgacacaggaa
ggtggcgaggaggcgctgacgcttctcgccagagcgatggaagacgaaaatgttgctgcc
ctcggagaggccgtgctgttccggcgtaaccgcgtggtcctcatccggccgagcggcagg
gcgctcgtcgcaaccacgctgaactttggttacgaggttcgggcagagaacaccgtcttc
aaatccatcccggacatcgagttcgatgacgaaatgctggaacttgccggtcatatcatc
gaaacgcgggccggcaccttcgatccctccgattatagcgaccgttacaacgatgccctt
gcggagctggtgaaagccaagattgaaggccgggaaatccgcaagcgggcgccgcagaaa
catgacaatgtgattgatctcaaggaggcgcttcgtcgcagcgcaagggaagacgctgga
aaaaaagcgaagccgtcaggccgcaagacgtcgcggaaagcgagctga
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