Agrobacterium sp. 33MFTa1.1: EYD00_22790
Help
Entry
EYD00_22790 CDS
T05906
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYD00_22790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agt02000
]
EYD00_22790
Transporters [BR:
agt02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EYD00_22790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBJ16195
LinkDB
All DBs
Position
linear:1974207..1976156
Genome browser
AA seq
649 aa
AA seq
DB search
MRDGEAFSLGVTRRTFMAGVGGVAALSVIGTSARAAAGKQAPELEALVKDGKLPPLAERL
PKNPMVVTPHEKIGTYGGTLRRGLRGSSDHNGILRMVGNQGLVRWNMDFTEVLPNLAVKW
EVNDDASQFTFHLLEGAKWSDGHPFTADDVVFAIEDCIKNKELYSATPAQLSVAGKAVDV
EKVDDFTVKFKFAAPNALYLENLATPLGQHPTLFPKHYCSKFLPKYNTALDADVKAAGVS
SWTELFRAKCGDIEIPSRWSNVDKPTLDPWVVKEPYSGGATRVVMTRNPYFWQVDTEGNQ
LPYIDEINFGISQDVESLMLNVISGKIDIQERHISVLANKPTLSQNMKKGDYRLLTLVPS
AAQQCQIYLNITHKDPAMRKMFADKSFRQALSIALNRQEIIDIVYFGQSEGYQAGPRPTH
PWYNEKLARQFTEYDADKANALLDKAGYDKKNGNGMRLRPDGQPIFFSIDVIPTLYPDLV
DALELVKAQWAQIGVDIKVNTIERALYYTRGDDNAHDAAVWPGPGGLDPMLDPRDFFAFH
PQGSRYAIPWALWYTSNGQKGEEPPESQKKRFKLFDEARSMADLAKRGEKMKQIFDIAAE
EFETIGLCLAVGGFGIIRNNLRNVPETEPDSWTWPNPGPALPQQFTFTS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatggcgaagcattttcactgggcgtaacgcgccgaacctttatggcgggtgtt
ggcggcgtggccgccctttccgtcatcgggacctcggcgcgggctgctgccggcaagcag
gcgccggaactggaggcgctggtaaaggacggcaaattgccgcctttggccgaacgcctg
ccgaaaaatccgatggtggtgacgccgcacgagaaaatcggcacctatggaggcacattg
cgccgtggcctgcgcggttcgtcggaccataacggcatcctgcgcatggtcggcaatcag
gggctggttcgctggaacatggatttcaccgaggttctgccgaaccttgcggtgaaatgg
gaagtcaacgacgatgcctcgcaattcaccttccatttgctggagggcgcaaaatggtcg
gacggccaccccttcaccgcagatgacgtggtgttcgccatcgaggactgcatcaagaac
aaggagctttacagtgccacgccggcgcagctctccgtggccggcaaggcggtcgatgtc
gaaaaagtcgacgatttcacggtaaagttcaaattcgccgcgccgaatgcgctttatctc
gaaaacctcgccacgccacttggccagcatccgacgctgtttcccaaacactattgcagc
aagttcctgccgaaatacaacacggcgctcgatgctgatgtgaaggcggcgggcgtctcc
agctggaccgaactgttccgcgccaaatgcggggatatcgaaattccctcccgctggtcg
aatgtcgacaagccgacgcttgatccatgggtggtgaaggagccttactccggcggtgcg
acacgggtggtcatgacccgcaacccatacttctggcaggtcgataccgaaggtaaccag
ttaccctatatcgatgaaatcaatttcggcatttcgcaggatgtcgaatcgctgatgctg
aacgtcatttccggcaagatcgacattcaggagcgccatatcagcgttctcgccaacaag
ccgaccctgtcgcagaacatgaaaaagggtgactaccgcctgctgactttggtgccgtct
gccgcgcagcagtgccagatttacctgaacatcacccacaaagacccggcaatgcgcaag
atgtttgcagataagtcttttcgtcaggcattgtccattgcgctcaaccggcaggaaatc
atcgacatcgtttatttcggccaaagcgaagggtatcaggccgggccacgcccgacacat
ccctggtacaacgaaaagctggcgcggcaattcaccgaatatgacgccgacaaggcgaac
gcgcttctcgacaaggccggttacgacaagaagaacggcaacggcatgcggcttcgtccc
gacggccagccgatcttcttctccatcgatgttatcccgacgctctatcccgatctggtc
gatgcgttggagctggtgaaggcgcaatgggcgcagatcggcgtcgacattaaggtcaat
accatcgaacgcgcgctctattatacacgcggcgatgacaacgcccatgatgcggccgtc
tggcccggtcccggcggtctcgatccgatgctcgatccgcgcgatttcttcgccttccac
ccgcaggggtcgcgttacgccattccgtgggcgctctggtatacatccaacggccagaag
ggcgaggagccgccagaaagccagaaaaagcgcttcaagcttttcgatgaggcgcgctcc
atggccgaccttgccaagcgcggcgagaagatgaagcagatcttcgacattgcggcggaa
gagttcgaaacgatcggcctctgccttgcggtgggcggtttcggcatcatccgcaacaat
ctgcgcaacgtgccggaaacggaacccgacagctggacctggcccaatcccggcccggcg
ctgccgcaacagttcaccttcacaagctga
DBGET
integrated database retrieval system
