KEGG   Agrobacterium sp. 33MFTa1.1: EYD00_25190
Entry
EYD00_25190       CDS       T05906                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
agt  Agrobacterium sp. 33MFTa1.1
Brite
KEGG Orthology (KO) [BR:agt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agt03032]
    EYD00_25190
   03036 Chromosome and associated proteins [BR:agt03036]
    EYD00_25190
   03400 DNA repair and recombination proteins [BR:agt03400]
    EYD00_25190
DNA replication proteins [BR:agt03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EYD00_25190
Chromosome and associated proteins [BR:agt03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EYD00_25190
DNA repair and recombination proteins [BR:agt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EYD00_25190
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QBJ16743
LinkDB
Position
p_JBx_073812:complement(372179..372457)
AA seq 92 aa
MTTTNEIADKIASEHGLTKVQGKAIVEAVIASITEAAVAGNETSLPGFGKFKVKDTPERE
ARNPATGATIKVAAAKKLAFTPAKALKDALNK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaccacgaccaatgaaattgccgacaagattgccagcgagcatggcctcaccaaggtt
cagggaaaagctatcgtagaggcggtgatcgcttcgatcaccgaggcggccgtggccggc
aacgagacatcgctgcccggcttcggcaaattcaaggtgaaggacactccggagcgcgag
gcgcgtaacccggcgactggcgcgacgatcaaggttgccgccgcgaaaaagctggctttt
acgcctgccaaggctctcaaggatgcgctgaacaagtaa

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