Agrobacterium sp. 33MFTa1.1: EYD00_25745
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Entry
EYD00_25745 CDS
T05906
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EYD00_25745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agt03400
]
EYD00_25745
DNA repair and recombination proteins [BR:
agt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EYD00_25745
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Ortholog
Paralog
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Motif
Pfam:
Ku
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
QBJ16873
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Position
p_JBx_073812:complement(486969..487868)
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AA seq
299 aa
AA seq
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MVAPRANWKGFIKFGEVACPVALYTAASSSERIAFNTLNRRTGNRVKREFIDTETGDPVE
RDAQVKGYEIENGQYIVLEPDEVAAAVPHSDKTLKIDAFIPCSEIDSVYFDKPYYLAPDR
MGTEAFVLLRDGMKRAKVAAIARTVLFRRLRTVLIRPHGKGLIATTLNFDYEVRSSAEAF
EELPDLKIEGEMLELAEHIIGTKKGTFDASTFNDRYEAAVAELVKAKIEGRALPKKKAAA
VPRQNDLLQALRESAGMGTKSSQKRAASNANKSAGRQKASKSGAAAKSNAVSSQTRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttgccccgcgagcgaactggaagggctttatcaaattcggagaggtcgcgtgtccc
gtggctctctacactgcggcatcatcatcggaacggatcgcgttcaacaccctcaatcgc
cgaaccggcaaccgggtgaaaagggaattcatcgacaccgagaccggcgatccggtggag
cgggacgcccaagtcaagggctatgagatcgagaacggccagtacatcgttcttgagccg
gacgaggtggctgccgccgtcccccacagcgacaagacgctgaagatcgacgccttcatc
ccctgcagtgaaatcgacagcgtctatttcgacaagccgtattatctggcgcccgacagg
atggggacggaagctttcgttcttttgcgcgatggcatgaaaagagccaaagttgctgcg
atcgcccgcaccgtgctcttccggcgcctgcgtacggtgctgatcaggccacacgggaag
ggcctgatcgccacgacgctcaactttgactatgaagtccgctcgtcggcagaggccttc
gaggagttgccggacctgaagattgaaggcgagatgcttgagcttgccgagcacattatc
ggcacaaagaaggggaccttcgacgccagcacgttcaacgaccgttatgaggccgccgtt
gccgagctggtgaaggccaagatcgagggcagggcactgccgaagaagaaggccgcagcc
gtcccccggcaaaacgaccttttgcaggcgctgcgtgagagtgctggcatgggcaccaaa
tccagccagaaacgtgccgcttctaacgccaacaagagtgctggccgtcaaaaggcttca
aaatcgggtgctgctgccaaatcaaatgcggtctcgtcacagacgcgccgcgccggctga
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