Acinetobacter guillouiae: AS4_02500
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Entry
AS4_02500 CDS
T06251
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
agu
Acinetobacter guillouiae
Pathway
agu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AS4_02500 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agu03021
]
AS4_02500 (rpoC)
03400 DNA repair and recombination proteins [BR:
agu03400
]
AS4_02500 (rpoC)
Enzymes [BR:
agu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AS4_02500 (rpoC)
Transcription machinery [BR:
agu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AS4_02500 (rpoC)
DNA repair and recombination proteins [BR:
agu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AS4_02500 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BAP35190
UniProt:
A0A077KSJ6
LinkDB
All DBs
Position
274599..278792
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPMEKYQLLNDEEYFTALEEHGDE
FSAKMGAEAVQDLLKDIDLEAEISRLREEIPNTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTHEVNR
ALATGQVDLHARVKARVHQTVIDENGNREHQTIVVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPQKQAIIE
KAEVEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSFTTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTLEGLVMTPFIQGGDVIEPL
SVRVLGRVTAEDVKKAGSDEVVLPRNTLIDEKIAAYLEDAGVDEVKVRSVVNCASTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILIKDGQPVEGGG
IVATWDPHTHPLVTEVAGKARFSQISDGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEISGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVGENQAVLAQNKFPAKYERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHELVND
FSEVDQAFSQALNEDSF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggattcagatggtcacgctccagta
gagtttgaccgtatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcac
ggtgaagttaaaaagccagaaaccattaactatcgtacgtttaagccagaacgtgatggt
ttattctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatataaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgca
aaagttcgtcgtgagcgtatgggtcacatcgagcttgcttctccagttgcgcatatttgg
ttcttgaaatcattaccaagccgtatcggtttattacttgatatgactttacgtgatatc
gaacgtgtattgtacttcgaatcttatgtcgttactgatcctggcatgacgccaatggaa
aagtaccaacttcttaacgatgaagaatacttcactgcgttagaagaacatggtgacgaa
ttcagcgcgaaaatgggtgcagaagcagttcaagatttgttgaaagacatcgatcttgaa
gctgaaatttctcgtttacgtgaagaaattccaaacacaacttcagaaacgaagcttaaa
aaagcctctaaacgtttgaagttgatggaagcgttcaaagagtcaaacaacaagccagaa
tggatggtgatgaatgtacttccagtacttccacctgatcttcgcccgttggtaccgctt
gaaggtggtcgttttgcgacttctgacttgaacgatctttatcgtcgtgtgatcaaccgt
aacaaccgtttaaaacgtcttcttgaccttgctgcaccagacattatcgtacgtaacgaa
aaacgtatgttacaagagtctgtagatgcgttattggacaatggtcgtcgtggtcgtgca
attaccggttcgaacaaacgtccgcttaaatctttggcagatatgatcaaaggtaagcaa
ggtcgtttccgtcaaaacttacttggtaagcgtgttgactactctggtcgttcggtcatt
actgtaggtccaactttacgtttgcaccaatgtggtcttccgaagaaaatggcacttgaa
ttattcaagccgtttatctttgctaagctacaagcttctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgaaactcctgaagtttgggacgttcttgcatctgta
attcgtcaacatccagtgatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcatttgaacctattctaattgaaggtaaagcgatccgtttacacccactcgtttgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggttcacgttccattaacacttgaa
gctcaattagaagctcgtgcgttaatgatgtcgaccaacaacatcttgtcacctgccaac
ggtgagccgatcatcgtaccttctcaggacgttgtcttgggcttatattacatcacacgt
gatgcaatcaatgccaaaggtgaaggcatggtgtttgcggatactcacgaagtaaaccgt
gcacttgcaacaggtcaagttgacttacatgcacgtgtaaaagcacgtgtacaccaaaca
gtgattgatgaaaacggtaaccgtgagcatcaaactattgttgtagatacgacacctggt
cgttgcttactttgggaagttgttcctgaaggtatggatttccaacaaatcaacgttgag
atgactaaaaagaacatctctaagttgattaactcttgctaccgtaaattaggtttgaaa
gatactgttatctttgctgaccaattgatgtacttgggcttccgtcaagcaacccgttct
ggtgtttctgtgggtatggaagacatgttgattccgccacaaaaacaagcaattatcgaa
aaagcagaagttgaagttcgtgaaattgaacaacaattcgagcaaggtttcgtaactgcg
ggtgagcgttacaacaaagttgtcgatatttgggcgcgtactaacgaccaagttgccaaa
gcgatgatggacaacttgtcattcacgactgttaaaaacaaacagggtgaagacgagaag
caaaaatcattcaacagtatctacatgatgtctgactctggtgcccgtggttcggcagct
cagattcgtcagcttgcaggtatgcgtggtttgatggcgaaaccagatggttcgatcatt
gagacaccgattaaagcaaacttccgtgaaggtctgacagtacttcagtacttcatttca
acacatggtgcgcgtaaaggtttggccgatacagcacttaaaacagcaaactctggttac
ttgacacgtcgtctagtcgacgttgcgcaagacttggttattactgagccagattgtggt
acgctcgaaggtcttgtaatgactccgttcattcaaggtggcgatgtcattgagccatta
agtgtacgtgtattaggacgtgtaactgctgaagacgtgaaaaaagcgggttcagatgaa
gttgtgcttccacgtaacacattgattgacgagaaaatcgctgcgtatcttgaagatgcg
ggtgtcgatgaagttaaagtacgttcagttgtaaactgtgcttcgactttcggtgtatgt
gctaaatgttatggtcgtgacttggcgcgtggtcacttggtgaatccaggtgaatctgtc
ggtgttatggctgcgcaatcaattggtgaacctggtacacagttaaccatgcgtacattc
cacgtaggtggtgctgcaagccgaacgtctgctgcaaatagcgtacaagtacgtaacaaa
ggtacagttcgtttccataacgttaaaactgttcaacatgccaaaggtcacttggtgtct
gtttcacgttcaggtgaaattggtatcgctgatgatttaggtcgcgaacgtgagcgttat
aaacttccatacggtgcgtctatcttgattaaagatggtcaacctgtagaaggcggcggt
attgttgcaacttgggatccacatacacatccattggttacagaagttgctggtaaagca
cgcttcagccaaatttcggatggcgtaactgcaacatcgaaaactgatgatgcaacgggt
atgaccacggttgaaattttacctgtaacagcacgtcctgcttctggtaaagatttgcgt
cctgcaatcgtgttggatacaaccgatggcggcgaacagttctacttcttgccacaaaac
acgatcgtgactgttcgtgatggcgagacgatcggtgttggtgacgttattggtcgtgta
ccacaagaaacttcacgtactcgtgatattactggtggtctgccacgtgtagctgacttg
ttcgaagcacgtaagccgaaagaacatgcaattcttgctgaaatctcaggtgttgtaagc
tttggtaaagaaaccaaaggtaagaaccgtttagtgattacaccagatgatggctctgaa
atttatgaagagttgattccaaaatggcgtaccattaacgtgtttgaaggtgagcatgtg
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttgcgtttgaaa
ggtgaagttgcattaaccaactacatcgtgaacgaagttcaagacgtttaccgcttacaa
ggtgtaaaaatcaacgataagcatatcgaagtaatcgttcgtcaaatgttgcgtaaagtt
gacattaccgacggtggcgatacaagctttatcaaaggcgaacaagtggattacatccgc
gttgtgggcgaaaaccaagcggtattggctcagaacaagttccctgcgaagtatgaacgt
caattgatgggtattaccaaagcatcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaacaactcgtgtgttaactgaagcggctgtaacaggtaaagaagatgattta
cgtggcttgaaagaaaacgttgttgtaggtcgcttgattccagcaggtactggtcttgca
taccacttagagcgtcgtcgtcaagaagcagaagctgcagagcatgagcttgtaaatgac
ttctctgaagttgatcaagcattctctcaagctttaaacgaagattctttctaa
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integrated database retrieval system
