KEGG   Acinetobacter guillouiae: AS4_12000
Entry
AS4_12000         CDS       T06251                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
agu  Acinetobacter guillouiae
Pathway
agu02024  Quorum sensing
agu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AS4_12000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AS4_12000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agu03019]
    AS4_12000
   03036 Chromosome and associated proteins [BR:agu03036]
    AS4_12000
Messenger RNA biogenesis [BR:agu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AS4_12000
Chromosome and associated proteins [BR:agu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AS4_12000
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: BAP36140
LinkDB
Position
1301275..1301652
AA seq 125 aa
MSKIQTLQDPLLNSLRKKHIPVFIFLTNGIKLQGHIESFDSYVVLLRNSVGQMQIIYKHS
ISTVLPTRHPRSNIKASLAKFDHQHSYNTFENDREYSFNSQNDFGYENGFNDEKHFEDIP
EDENT
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtctaaaattcaaaccttacaagatccgctgttaaattctctccgaaaaaagcatatt
ccagtttttatttttctgaccaatgggattaaattacaggggcatattgaatcttttgat
tcatatgtcgtgttactaaggaacagtgtagggcaaatgcaaattatctataaacattca
atttctactgttttgcctacacgccatcctcgttcaaatattaaagcctcccttgcaaaa
tttgatcatcaacacagttacaacacctttgaaaatgatcgtgaatattcatttaatagc
caaaatgactttggttatgaaaatggttttaatgatgaaaaacactttgaagatattcct
gaagatgaaaatacttga

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