Acinetobacter guillouiae: AS4_13660
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Entry
AS4_13660 CDS
T06251
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
agu
Acinetobacter guillouiae
Brite
KEGG Orthology (KO) [BR:
agu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agu03019
]
AS4_13660 (hrpA)
Enzymes [BR:
agu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AS4_13660 (hrpA)
Messenger RNA biogenesis [BR:
agu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AS4_13660 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
Nit_Regul_Hom
ResIII
NACHT
PhoH
AAA_30
HA2_N
SLFN-g3_helicase
TsaE
Flavi_DEAD
AAA_23
SRP54
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAP36306
LinkDB
All DBs
Position
1467075..1471055
Genome browser
AA seq
1326 aa
AA seq
DB search
MPNQLNVDQWVMVRDRHRLNRLKKGKDAHPEKFQELFEKSNHQVKKRLASLPTIKLNQDL
PVTQYADKLIEAIQKHQIIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESISFKVRFNEQGSNDSIVRLMTDGILLAELSNDRYLNKYDTIIID
EAHERSLNIDFIMGYLKQLVKKRPDLKIIITSATLDVNRFSEYFNGAPIFEVEGRSFPVE
LRYRPISEMTIGGSDDDDFDDFEENLPRAVVQAVEECFKDAESKGHPEHADILIFSSTEQ
EIRELQETLQKFGPKHTQILPLYARLALAEQQKIFNPSGGGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRIAPGVCIRLYSEDDFQSR
PDFTEPEIKRTNLASVILQMQSLGLGAVEDFDFIEPPDHRLVNDGRKLLIELGAIHEVQN
SNNFPQVVAQSESAVSQQGVVDGDKVKKLAQPATKKAELQNNSLTKIGLQMAKMPIDPRL
ARMILGGAHFGVLNEVLIIVAALAVQDPRERPADKQMQADQKHALFKEADSDFLFYIKLW
NTLTENRETLSESKRRNFAKQHFLSWLRLREWKKTHEQLLDLAQGLKLSFNEKTASYENL
HRALLTGLLSFIANKTDERNIFMAVRQQKARIFPASTLHKTNTPWVMAFEMVETSQVYLR
TLAKIEPEWILLAAPNLLKHHYFEPHWAKKPGVVNAYDQISLFGLIIEPKRATNYEKVDQ
LAAHEIFLRDALTTGNLGTTPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYAAK
VPTEIASRRSFEDWRATVEPQNPRYLFVDDDDLWMNDRPTTQQFPDYLHNGQLRLAASYR
FDPSHDEDGATVKIPVQALAQVDENIWSWGIPGWRLDLIEALLKALPKDKRRNLVPIPDT
ANKLIKVIDAQHLHQHIFEFLAFQLRGEQITSKDFSFERIDQYLIPFIKVIDEKGRVIEK
GRDLAELKARCRTETHSPVKQLKGEFTTFPESFVFEASQKVTGVVVKQYQALVPSKDFAK
LELKDDSGIVIQTFNDQSEAIKQHREGVIRLIHMQLGDLIRQLKKQISKPLALAYSPLGD
KAQLEQMLVYATLQMAIQDLPINAEEFAIVMADVKKSFLSHGQEALKLISEIYIQWQEIR
QQLLMLDQDVFAKNMNDIEDQLDLMNLSNFVYSKSSDIWQEYPRYLKALLLRLDRLPNNL
NRDDAAIKEVDPWMDKLFKFKSDVRVKEVYFMVEELRISLFSQPMKTKMPISSTRIQKVW
EKLGIG
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaatcagttaaatgtcgatcaatgggttatggtacgagatcgccatcgtttaaat
cgactgaaaaaaggaaaagatgctcatcctgaaaaattccaagaactatttgagaaatca
aatcatcaagtcaaaaaaagattagccagtctaccgacaattaaactcaatcaggatcta
ccagttacccagtatgcagataaactgattgaagcgattcaaaagcatcagattattatt
gttgcaggggaaacgggttctggtaaaaccacacaattgccacagatcgcaatgcttgca
ggtcgtggtttaactgggatgattggtcatactcagcctcgacgtctggcagcacgaagt
gtatcgcaacgtattgctgaagaagtcggtgagaagctgggtgaaagcatcagttttaaa
gtgcgttttaatgaacaaggatcaaatgattcaatcgttcgcttaatgacggacggtatt
cttcttgctgaactttctaatgatcgttatttaaataaatatgacacgattattattgat
gaagcgcatgagcgttcattaaacattgacttcatcatgggttacctgaagcaactggta
aaaaagcgccctgatttaaaaatcattattacttcagcgacattagatgtgaatcgcttt
agcgaatattttaatggcgcaccgatttttgaagtggaaggacgtagctttccagtagaa
ctgcgttatcgtccaatttctgagatgacgatcggcggcagtgatgatgatgactttgat
gattttgaagaaaatttaccacgcgcagtggtacaagctgtagaagaatgttttaaggat
gctgaatctaaaggacatcctgaacatgcggatattcttattttttcaagcactgaacaa
gaaattcgagaactacaagagaccttacaaaaatttggtcctaaacacacgcaaatttta
ccgttatatgcacgtttagctttagccgaacagcagaaaatctttaatccctctggtggt
gggcgacgtattatcatcgcgaccaacgtcgctgaaacagcgttgactgtaccgaatatt
cgttatgtgatcgacagtggctttgcgcgtatttctcgctataactatcgttcacgggtg
cagcgtttaccaattgaagcgatttctcaagctgctgcaaaccagcgtaaagggcgatgt
ggtcgtattgcaccaggtgtttgcattcgcttatacagtgaagatgattttcaaagtcgt
ccagattttactgaacccgaaattaaacgaaccaatttagcatcggttattttacagatg
caaagtctaggtttaggtgctgtagaagattttgattttattgagccaccagaccatcgt
ttggtcaatgatggacgtaagttgctgattgaattaggtgctatccatgaagtgcaaaat
tcaaataattttcctcaagtggttgcacaaagtgaaagtgcggtttcccaacagggagta
gtagatggtgataaagtaaaaaaacttgctcaacctgctactaaaaaagccgaacttcaa
aacaacagtttaaccaaaatcggtctacaaatggcaaaaatgccaatagacccacgcctt
gcacggatgattctcggtggtgctcattttggggtgctgaatgaagttttaattattgtt
gctgcgcttgcagtacaagacccacgcgagcgtcctgctgataagcaaatgcaggcggat
caaaaacatgcattatttaaagaagcagattcagattttctattctatattaaactgtgg
aatacactgactgaaaatcgtgaaactttaagtgaaagcaaaagacgtaattttgccaaa
cagcattttcttagctggttgcgcttacgcgagtggaagaaaacgcatgaacaattactg
gatttagcacagggcttaaaactttcattcaatgaaaagacagccagttatgaaaattta
catcgtgctttattgacagggttattgtcttttattgccaataaaactgacgaacgtaat
atttttatggcagttcgtcagcaaaaagcccgaatttttcctgcatcgaccttacataaa
accaataccccatgggtgatggcatttgaaatggtcgaaacctcacaggtgtatttacgc
acactggcaaaaattgagcctgagtggattcttttagctgcgcctaacttattaaaacat
cattattttgagccacattgggcgaaaaaaccgggtgtggtcaatgcttatgatcagatt
tcattatttgggctgatcattgaaccgaagcgcgccaccaattatgaaaaagtggatcag
ttggctgcgcatgaaattttcttaagagatgcactaaccacaggaaacttgggaacaacg
ccaccattcttaaaacacaacctattaaagcttgaagaagttgagcgtgtggaagacaaa
ctgcgtcgtcgtgatttggtcgttgatgaagaaaccatttatcagttttatgccgcaaaa
gtacctacagaaattgccagtcggcgtagttttgaagattggcgagcaacagtagagccg
cagaatcctcgttatctgtttgttgatgatgatgatttatggatgaatgatcgtccaacc
acgcaacaatttccagattatttacataatggacaattacgtttagctgccagctatcgt
tttgatccaagtcatgatgaagatggcgcaacagtaaaaattccggtacaggccttagcg
caagttgatgaaaatatttggtcttggggaattccgggttggcgtttggatttaatcgaa
gcgttattaaaagccttaccaaaagataaacgtcgaaatttggtgccgatcccagataca
gccaataaattgatcaaagtaattgatgcacaacatttgcatcagcatatttttgagttt
ttggcatttcaattacgtggtgaacaaattaccagtaaagatttttcttttgaacgtatt
gatcagtacttaattccatttatcaaagtaattgatgaaaaaggccgcgtgattgaaaaa
ggccgtgatcttgccgaactcaaagcacgttgtcgaactgaaacacacagtcccgtcaaa
cagttaaaaggtgagtttactacttttcctgaaagctttgtatttgaggcctctcagaag
gtgacaggggttgtggttaaacaatatcaggcactggtcccgagcaaagactttgctaag
ttagagttgaaagatgactctggtattgtgattcagacttttaatgatcaaagtgaagcg
attaagcagcaccgtgaaggcgtaattcgtttgattcatatgcaattgggggatttgatt
cgtcaattgaaaaagcaaatttccaagccactggcattggcatattctcctttgggtgat
aaagcgcaacttgagcaaatgttggtgtacgcaacattacaaatggcaattcaagattta
cccattaatgctgaagaatttgcgatagtcatggcagatgtgaaaaagtcatttttaagt
catggtcaggaagcattaaagctgatcagtgaaatttatattcaatggcaggaaatacgc
cagcaattgttgatgttggatcaagatgtatttgctaaaaatatgaatgatattgaagat
caactggatttaatgaacttatccaattttgtttattcaaaatcttccgatatttggcag
gaatatccacgttatttaaaagcattgttattgcgtttagatcgattgccgaataatcta
aatcgtgatgatgctgcaattaaagaagtagatccttggatggataaactgtttaagttt
aagtcggatgttcgtgttaaagaagtctacttcatggttgaggaactacgtatttcatta
ttttctcaaccaatgaaaaccaagatgccgatttcgtcaaccagaatacaaaaagtatgg
gaaaagcttggaatcggttag
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