Acinetobacter guillouiae: AS4_38740
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Entry
AS4_38740 CDS
T06251
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
agu
Acinetobacter guillouiae
Pathway
agu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS4_38740 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agu03019
]
AS4_38740 (rnr)
03016 Transfer RNA biogenesis [BR:
agu03016
]
AS4_38740 (rnr)
Enzymes [BR:
agu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AS4_38740 (rnr)
Messenger RNA biogenesis [BR:
agu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AS4_38740 (rnr)
Transfer RNA biogenesis [BR:
agu03016
]
Prokaryotic type
tRNA degradation factors
AS4_38740 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAP38814
LinkDB
All DBs
Position
4123392..4125839
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AA seq
815 aa
AA seq
DB search
MKNWVDPEAKAEAERYDNPIPSRTLILEIIERKQEALSHADLVELLEIVDQKSIDALSHR
LSAMVRDGQLMKDGFKYQLMADQPTLDATVYVNAKGLGVASLDGKKDEFLLPERELRQVF
HGDRVKVQQTSVDRKGKAWGYITEVTQRRVKQLIGKVAEFEGEYFIQPAPPNAHQPITLE
KELIEHAKAKVGDALRVEIDDYPTRDEFATGHVIQSMADKADTEIIIPQTILEYGLPYEF
PEEVIKEAEAFKEPSAKDRQGRIDLRDLPLVTIDGEDARDFDDAVYAEKRPGGGYRVVVA
IADVSHYVRVGKPLDDEAQERGTSVYFPHYVLPMLPEALSNGLCSLNPHVDRLCMVCDLN
LSRAGKVTKFEFYPSVMHSKARLTYTQVAQYLDGDSNAIPEDRDVRKSVNTLYQLYETLK
GLRAQRHAMEFETVETYMTFDELGGIKEILPRSRNVAHKLIEECMLLANVAAAEYCLKNE
VPMLYRVHEAPEFSRIQKVKDFVKLLGFKFPDQPTQADYQTVIEATKDRIDAPSIHAVLL
RSMMQAYYGPKNVGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKASLTNKKYPLSGAALED
AGEHFSATERRADEASRSVTSWLKCHYMQQHLGEEFVGVISATAEFGLFVTLKDLYVDGM
IHVSQLGDDYFVYDQVSQNLVGQNRGQAFGLGDEVKIKVAGVNLEERKIDFELLQQLSHA
GRVIRSRAPRVAKPVAKEEVFSERPVKVKSESDSGNAGEDGERPIRKKKPKGKPSSYTKK
PGKSAAAQPETKAKDKVKKKAKAKKKKSNAKAKTE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattgggtcgatcctgaagccaaagctgaagctgagcgttacgacaatcccatt
ccaagtcgtacccttatcctagaaatcattgaacgaaaacaagaagcattgtcacatgca
gatcttgttgaactgcttgaaattgtcgatcaaaaaagtatagatgcgctcagccatcgt
ttaagtgcaatggtgcgtgatggtcagttgatgaaagatggttttaaatatcagctgatg
gccgatcaacctaccctagacgctactgtttatgtcaacgctaaaggtttaggtgttgca
agcttagatgggaagaaagatgagttccttctgcctgagcgcgaattacgtcaagtcttc
catggtgaccgcgttaaagtccaacaaacttctgtagaccgtaaaggtaaagcttggggc
tatattactgaagtgactcaacgtcgagttaaacaactgatcggtaaagttgcagaattt
gaaggtgaatactttattcaacctgcacctcccaatgcacatcagcccataactttagaa
aaagaactgattgaacatgccaaagccaaagtcggcgatgcattacgtgttgaaattgat
gactatccaacacgagatgaatttgcgacaggtcatgtgattcaatcaatggcggataaa
gccgatactgaaatcattatcccgcaaaccattttagaatatggtttaccttatgaattc
ccagaagaagtcatcaaagaagctgaagcatttaaagaaccttctgcaaaagatcgtcaa
ggccgtatagatttacgagatttgcctttagtcaccattgatggtgaagacgcacgtgat
ttcgatgatgcagtctatgcggaaaaacgtcctggtggtggctatcgtgtcgttgtcgcg
attgcagatgtcagtcattatgtccgtgttggtaaacctttagatgatgaagcgcaagaa
cgtggtacatcggtgtatttcccacactatgtattaccaatgttgcctgaagcactttca
aatggcttatgttctttaaatccacatgttgaccgtttatgcatggtgtgtgatttaaat
ttaagccgtgctggtaaagtgactaaatttgaattttatccgtcagtgatgcattcaaaa
gcacgtttaacctatacccaagttgcacaatatttggatggcgacagcaatgcgattcct
gaagatcgtgatgtccgtaagtcagtcaatacgctctaccaattgtatgaaaccttaaaa
ggtttacgtgcacaacgtcatgcaatggaatttgaaaccgttgaaacctacatgactttt
gatgaattgggtggaattaaagaaattttaccgcgttcacgtaatgttgcgcataagctt
attgaagaatgtatgttgcttgctaacgttgcagcagcggaatattgcttaaaaaatgaa
gttccaatgttgtatcgtgtgcatgaagcaccagagttttcacgcattcaaaaagtaaaa
gactttgtgaaattattgggctttaaattccctgaccaaccgacacaagccgattatcaa
acggtgattgaagcaaccaaagatcgtattgatgcaccgagtattcatgcggtgctatta
cgttcaatgatgcaagcctactatggtccaaaaaatgtggggcactatggcttggcttat
gaagcatatacccatttcacttcaccaattcgtcgctaccctgacctgctattacatcgt
gcgattaaagccagtttaaccaacaaaaagtatcctctttcaggtgcagcattagaagat
gcgggtgaacatttctctgcaactgaacgccgtgcagatgaagcttcgcgttcggttact
tcatggctgaaatgtcactatatgcagcaacatttaggcgaagaatttgttggtgtgatc
agtgcaactgctgaatttggtttatttgtaaccctaaaagatctgtatgtggatggtatg
attcacgtgagtcaattgggcgatgactactttgtttatgaccaagttagtcaaaattta
gtcggtcaaaatcgaggtcaagcctttggcttgggtgacgaagtcaagatcaaagttgct
ggggttaacctagaagaacgtaagattgattttgaattgttacaacaactgtcgcatgcc
ggtcgtgtaatccgtagtcgtgcaccacgtgttgcaaaacccgttgccaaagaagaagtt
ttttctgaacgtcctgtcaaagttaaatctgaatctgacagtgggaatgccggcgaagat
ggggaacgccccattcgaaagaaaaagcccaaaggaaaacccagctcttacactaagaaa
cctggaaaaagtgctgcagctcagcctgaaacaaaggctaaagataaagtgaagaaaaag
gcgaaagcaaaaaagaaaaagtcgaacgcaaaagcaaagactgagtaa
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