Aquisphaera giovannonii: OJF2_06550
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Entry
OJF2_06550 CDS
T06184
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agv
Aquisphaera giovannonii
Pathway
agv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OJF2_06550 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agv03021
]
OJF2_06550 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
agv03400
]
OJF2_06550 (rpoA_1)
Enzymes [BR:
agv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OJF2_06550 (rpoA_1)
Transcription machinery [BR:
agv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OJF2_06550 (rpoA_1)
DNA repair and recombination proteins [BR:
agv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OJF2_06550 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEH32186
UniProt:
A0A5B9VUL7
LinkDB
All DBs
Position
complement(940148..941143)
Genome browser
AA seq
331 aa
AA seq
DB search
MRIRWRGLELPSRVVCNRETLTDTFGEFHVEPFERGFGNTVGNSLRRILLSSLEGSAITK
IKIQGVQHEFSSIPGMVDDITDLVLNVKLLVVKNHSETSRTIRIDRDRRGVVTASDIVHD
ESVEIINPDHILCTLTDDVAFHMDMTVENGRGYRTAAEGHTEDIEIGEIPVDASFSPVQR
VEYDVQNTRVGQRTNYEKLVMRIWTTGVLGPEMALVEAAKILRKHLNPFVQYNEPGPGIS
ADSSGHDGGQHAPIDAELERKLDMSLAELELSVRATNCLESEGITTVRHLVSRSEDQLLN
VRNFGETTLKEVRAKLHEIGLDLGMNVPPKG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccgttggcgaggcctcgagctgcccagccgcgtcgtctgcaaccgcgagacc
ctgaccgacaccttcggcgagttccacgtcgagcccttcgaacgcggcttcgggaacacc
gtcggcaacagcctgcgccggatcctcctctccagcctcgaggggtcggccatcaccaag
atcaagatccagggcgtccagcacgagttctcgtcgatcccgggcatggtcgacgacatc
accgacctggtcctcaacgtcaagctcctggtcgtcaagaaccactccgagaccagccgg
accatccgcatcgaccgcgaccgccgcggcgtcgtcacggcctcggacatcgtccacgac
gagtcggtggagatcatcaaccccgaccacatcctctgcacgctcaccgacgacgtcgcg
ttccacatggacatgaccgtcgagaacggccgcggctaccggaccgccgccgagggccac
accgaggacatcgagatcggcgagatccccgtcgacgccagcttcagcccggtccagcgc
gtcgaatacgacgtccagaacacccgcgtcggccagcgcacgaactacgagaagctcgtc
atgcggatctggaccaccggcgtcctcggccccgagatggcgctcgtcgaggcggccaag
atcctccgcaagcacctcaacccgttcgtccagtacaacgagccgggcccgggcatctcg
gccgactcctccggccacgacggcggccagcacgccccgatcgacgccgagctcgagcgg
aagctggacatgagcctggccgagctggagctctccgtccgggccaccaactgcctggag
agcgagggcatcaccaccgtccgccacctggtcagccggtccgaggaccagctcctgaac
gtccgcaacttcggcgagaccaccctgaaggaagtccgcgccaagctccacgagatcggc
ctggacctgggcatgaacgtcccgcccaagggctga
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