Aquisphaera giovannonii: OJF2_09360
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Entry
OJF2_09360 CDS
T06184
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
agv
Aquisphaera giovannonii
Pathway
agv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OJF2_09360 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agv03021
]
OJF2_09360 (rpoB)
03400 DNA repair and recombination proteins [BR:
agv03400
]
OJF2_09360 (rpoB)
Enzymes [BR:
agv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OJF2_09360 (rpoB)
Transcription machinery [BR:
agv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OJF2_09360 (rpoB)
DNA repair and recombination proteins [BR:
agv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OJF2_09360 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QEH32465
UniProt:
A0A5B9VXG3
LinkDB
All DBs
Position
complement(1317511..1321242)
Genome browser
AA seq
1243 aa
AA seq
DB search
MPTPTTVRRIVPPQRRNFGRIHDEFPVPDLTVIQTRSYERFLQADIPPEERTDSGLEGVF
REIFPVESYDKTLKLEYLRYDLGKPRYDPDECRQLRLTYGRPLHVWLRLNKGETVLEESV
YLGDMPIMIGGGEFIINGAERVVVSQLHRSPGVDFVVEIESSDKKLHACRVIPERGSWIE
LQVTKKETLGVRIDQSGKFSSMTLLRAMSPQYSSDDAILRAFYESEAIDSADPKAAAKLE
GRITCGDVVDPTTGEVLIDSGATISKALAQVLADAGAKLGPIEVLKEARDQLILQSLQED
PTTDHESALLRIYQRLRPGNPPQLEKARELFHEKFFDTNRYRLGRVGRFRINRKFNQDVP
EDLMTLDPLDYVNAIRYILRLRKGNDPRVHVDDIDHLGNRRLRTIDELAADELRKGFLKL
RRTVQERMSLKEADDQTPRLLINPKSISAAIEYFFGRGELSQVVDQTNPLAQLTHERRLS
ALGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLGIYGGVDEYGFLITPY
RKVKSGKPVEGNEGVVWMRADEESEAHLAPADAHIDDHGKLKGPALIARYQTDFVSVPVD
KIEYMDISPKQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPIVCTGLERSV
AMNSGMVVKALQDGTITYVDSTRIIIDHNHIYKLRKYVGLNERTCLNQKPVVQVGQKVKS
GDILADGASTFHGELALGRNVLVAFQAWDGYNFEDAIIISEKLVRDDVYTSIHIEEFEIE
IRETKLGREEFTRDIPNVSEKALRNLDDNGVVRIGTYVKPGDILVGKVAPKSKSELTPEE
KLLHAIFGRAGEDVKNDSLEVPSGVEGIVINTQRFSRRVSLSEDERKAFEKELKDTEAGE
NARIADEYRQMIKALEEVVGGPVADPNTGKPLGRAKDAKDLVEESDRFKAESLDIRSPDA
IKKVKEVARQYAPRIEALKDEKERRLNSLKRGDELPSGVLQMVKVYIATKRVISVGDKMA
GRHGNKGVIAKILPEEDMPFLEDGTAVEILLNPLGVPSRMNVGQILETHLGWAAAKLGFQ
AVCPVFDGASEETIRQCLKDAGLPENGKATLYDGRTGQKFDQRTTVGYIYMLKLHHLVDD
KIHARATGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGR
TKIYESMVKGENTLEAGTPASFDVLTNEIRGLGLNMQLEKKRI
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcccactccgacgaccgtgcgccgcatcgtccccccccagcgccgcaacttcggccgg
atccacgatgagttccccgtccccgacctgaccgtcatccagacccgcagctacgagcgc
ttcctccaggccgacatcccgcccgaggaacggaccgactccggcctcgagggggtcttc
cgcgagatcttccccgtcgagagctacgacaagacgctcaagctcgagtacctccgctac
gacctgggcaagccgcgctacgaccccgacgagtgccgccagctccgcctcacctacggc
cggccgctccacgtctggctccgcctcaacaagggcgagaccgtgctggaggagtcggtc
tacctcggcgacatgccgatcatgatcggcggcggcgagttcatcatcaacggcgccgag
cgcgtcgtcgtcagccagctccaccgctccccgggcgtcgacttcgtcgtcgagatcgag
tccagcgacaagaagctgcacgcctgccgggtgatccccgagcgcggcagctggatcgag
ctgcaggtcaccaagaaggagaccctgggcgtccgcatcgaccagtcgggcaagttctcg
tcgatgaccctgctccgcgccatgagcccgcagtactcctccgacgacgccatcctccgc
gccttctacgagagcgaggcgatcgactccgccgaccccaaggccgcggcgaagctggaa
gggcggatcacctgcggcgacgtcgtggacccgaccaccggcgaggtcctcatcgacagc
ggcgccacgatctccaaggccctggcccaggtcctggccgacgccggcgccaagctcggc
ccgatcgaggtcctcaaggaggcgcgcgaccagctgatcctccagtcgctccaggaggac
ccgaccaccgaccacgagagcgccctgctgcggatctaccagcggctccggccgggcaac
ccgccgcagctggagaaggcccgcgaactcttccacgagaagttcttcgacaccaaccgc
taccgcctggggcgcgtcggccggttccggatcaaccggaagttcaaccaggacgtgccc
gaagacctgatgaccctggacccgctggactacgtcaacgccatccgctacatcctccgc
ctgcggaagggcaacgacccgagggtccacgtcgacgacatcgaccacctgggcaaccgc
cggctgcggacgatcgacgagctcgccgccgacgagctgcgcaagggcttcctcaagctc
cgccgcaccgtccaggagcggatgagcctcaaggaggccgacgaccagaccccgcggctg
ctgatcaaccccaagagcatcagcgcggcgatcgagtacttcttcggccgcggcgagctg
tcccaggtcgtcgaccagaccaatccgctggcccagctcacccacgagcggcggctctcc
gcgctggggccgggcggcctgaaccggaagcgggccggcttcgaggtccgcgacgtccac
atctcccactacggccgcatctgcccgatcgagacccccgaggggacgaacatcggcctg
atcagctcgctgggcatctacggcggcgtggacgagtacggcttcctcatcaccccctac
cgcaaggtcaagtcgggcaagcccgtcgaggggaatgagggcgtggtctggatgcgggcc
gacgaggagagcgaggcgcacctcgccccggcggacgcccacatcgacgaccacggcaag
ctcaagggccccgcgctgatcgcccgctaccagaccgacttcgtcagcgtgccggtggac
aagatcgagtacatggacatctcgcccaagcagatggtgggcgtgtccgcgggcctgatc
ccgttcctcgagcacgacgacgccaaccgcgcgctgatgggctccaacatgcagcgccag
gcggtccccctgctggtcgcggagccgccgatcgtctgcaccgggctggagcggtcggtc
gcgatgaactccgggatggtcgtgaaggccctccaggacggcacgatcacctacgtggac
tccacccggatcatcatcgaccacaaccacatctacaagctccgcaagtacgtcggcctg
aacgagcggacctgcctgaaccagaagccggtcgtccaggtcggccagaaggtgaagagc
ggggacatcctcgccgacggggcctccaccttccacggcgagctggccctggggcggaac
gtcctggtcgcgttccaggcgtgggacggctacaacttcgaggacgcgatcatcatcagc
gagaagctggtgcgggacgacgtctacacctcgatccacatcgaggagttcgagatcgag
atccgcgagacgaagctcggccgcgaggagttcacgcgggacatccccaacgtctccgag
aaggcgctgcggaacctcgacgacaacggcgtggtccggatcggcacctacgtcaagccg
ggcgacatcctggtgggcaaggtggcccccaagagcaagagcgagctgacgcccgaggag
aagctgctgcacgcgatcttcggccgggccggcgaggacgtgaagaacgactcgctggag
gtcccctcgggcgtggaggggatcgtgatcaacacccagcggttcagccgccgggtgagc
ctgagcgaggacgagcggaaggccttcgagaaggagctgaaggacaccgaggccggcgag
aacgcgcggatcgccgacgagtaccggcagatgatcaaggccctggaggaggtggtcggc
ggccccgtggccgaccccaacaccggcaagccgctgggccgggccaaggacgccaaggac
ctcgtcgaggagagcgaccggttcaaggccgagtccctggacatccgcagcccggacgcg
atcaagaaggtgaaggaggtcgcccgccagtacgccccgcggatcgaggccctcaaggac
gagaaggagcggcggctcaacagcctgaagcggggcgacgagctcccctcgggcgtgctc
cagatggtgaaggtctacatcgccaccaagcgggtcatctccgtcggcgacaagatggcc
ggccgccacggcaacaagggggtcatcgccaagatcctccccgaggaggacatgccgttc
ctggaggacggcacggcggtggagatcctcctcaacccgctgggcgtgccgagccgcatg
aacgtgggccagatcctcgagacgcacctgggctgggccgcggccaagctcggcttccag
gccgtctgcccggtcttcgacggggcgagcgaggagaccatccgccagtgcctcaaggac
gccggcctgccggagaacggcaaggccacgctgtatgacggccggaccggccagaagttc
gaccagcggaccacggtgggctacatctacatgttgaagctccaccacctggtcgacgac
aagatccacgcccgcgccaccgggccctacagcctcatcacccagcagccgctgggcggc
aaggcgcggttcggcggccagcggttcggcgagatggaggtgtgggccctggaggcctac
ggcgccgcctacatcctccaggagctcctcaccgtcaagtccgacgacgtcgagggccgc
accaagatctacgagagcatggtcaagggcgagaacaccctggaggccggcacccccgcc
agcttcgacgtgctcaccaacgagatccgcggcctcgggctgaacatgcagctcgagaag
aagcggatctga
DBGET
integrated database retrieval system
