Aquisphaera giovannonii: OJF2_12170
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Entry
OJF2_12170 CDS
T06184
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agv
Aquisphaera giovannonii
Pathway
agv03420
Nucleotide excision repair
agv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OJF2_12170 (pcrA_1)
03430 Mismatch repair
OJF2_12170 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agv03400
]
OJF2_12170 (pcrA_1)
Enzymes [BR:
agv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OJF2_12170 (pcrA_1)
DNA repair and recombination proteins [BR:
agv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OJF2_12170 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
OJF2_12170 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH_5
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEH32738
UniProt:
A0A5B9VWU3
LinkDB
All DBs
Position
complement(1692711..1694738)
Genome browser
AA seq
675 aa
AA seq
DB search
MRKITLKHTMPAKLARHLDEDLNESQRAAVTAPDGYNLILAGPGSGKTRVITYRVAFLIA
RGIPAQSILLVTFTRRAAREMVHRLETLVGPGAQKVWAGTFHAVGNRILRRPAHLLGYEP
NFTILDGEDQLDLVKLAWQDAGLSGQAKLAPKPDEIMRLISLGLNTRQTLADLVAGPHPH
LADWLPQIEKVAEAYAARKRAANCMDYDDLLGLWLKLIREFPDQLREQADLFRHILIDEM
QDTNALQVETVETIAAAGAGNLTAVGDDAQSIYRFRGANYDNILEFPKRHPGSRTFMLDV
NYRSTPQIVALTADSIRHNRSGFPKALTSARGDGLLPAVVATADVYEEADLVCQQVLEAR
DNDVPLGEVAVLYRNHYDSVVLQGELVTRGIPYSVRSGLRFFEQAHIKDVLAHLRVAVNP
RDEASWRRLLLMLPGIGPAKAAALFGKIGDSPDPIAAMATKEAMDAVPAKTRGLYAAFVG
DMRKLLATDPERHPAEAINAILKGGYPAVVRQKYERPENRLADLEQFAVLAARYDSLERL
LAELLLAGDVYGMDTVASSDPKDVLVLTTVHQAKGLEWSHVFVIRLVEDSFPHLRAVNEP
GGDEEERRIFYVAVSRAKNELTLTYPSTITRGGYGPMTFATPSRFLTELEPTLYERAELD
REFLPLEDDRPRGGR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagatcacgctcaagcataccatgcccgcgaagctcgccaggcacctcgacgag
gacctgaacgagtcgcagcgggcggcggtcaccgcgccggacggctacaacctcatcctg
gccgggccggggtccggcaagacgcgggtgatcacctaccgcgtggccttcctgatcgcc
cgggggatccccgcgcagtcgatcctgctcgtgaccttcacccgccgggccgcccgggag
atggtccaccggctggagaccctcgtcggccccggggcccagaaggtgtgggccggcacc
ttccacgcggtcggcaatcggatcctgcggcggccggcgcacctgctgggctacgagccg
aacttcacgatcctcgacggcgaggaccagctcgacctcgtgaagctcgcctggcaggac
gcggggctgtccggccaggccaagctcgcgccgaaacccgacgagatcatgcgcctgatc
agcctgggcctgaacacgaggcagaccctggcggacctcgtggccggcccgcacccgcac
ctggcggactggctgccgcagatcgagaaggtcgccgaggcgtacgcggcccgcaagcgt
gcggccaactgcatggactacgacgacctgctgggcctctggctgaagctgatccgggag
ttccccgaccagctccgggagcaggccgatctgttccggcacatcctcatcgacgagatg
caggacaccaatgcgctccaggtcgagaccgtggagacgatcgccgccgcgggggccggc
aacctcacggccgtgggcgacgacgcccagtcgatctaccggttccggggtgcgaactac
gacaacatcctggagttccccaagcggcacccgggctcgcggacgttcatgctcgacgtg
aattaccgctcgacgccccagatcgtcgcgctgacggcggactccatccggcacaaccgg
tcgggattccccaaggcgctcacctcggcccggggcgacggcctgctgccggcggtggtc
gcgacggcggacgtctacgaggaggcggacctcgtctgccagcaggtcctggaggcccgg
gacaacgacgtgccgctcggcgaggtggccgtcctctaccgcaaccactacgacagcgtc
gtcctccagggcgagctcgtgacgcgggggatcccgtattcggtccggagcgggctgcgg
ttcttcgagcaggcccacatcaaggacgtgctggcccacctccgggtcgcggtcaacccg
cgggacgaggcgtcgtggcggaggctcctcctgatgctgccggggatcgggccggcgaag
gccgcggcgctcttcggcaagatcggcgactcgcccgaccccatcgccgcgatggccacg
aaggaggccatggacgccgtgccggccaagacccggggcctctacgccgccttcgtgggc
gacatgcggaagctcctggcgaccgacccggagcggcatccggcggaggccatcaacgcc
atcctcaagggggggtacccggcggtcgtccgccagaaatacgagcggccggagaaccgg
ctggccgacctggagcagttcgccgtcctggccgcccgttacgacagcctggagcggctc
ctcgccgagctgctgctggccggcgacgtctacggcatggacaccgtcgcgtcgtccgac
ccgaaggacgtgctcgtgctcacgacggtccaccaggccaagggcctggagtggtcgcac
gtcttcgtgatccgcctcgtggaggacagcttcccccacctccgtgccgtcaacgagccg
ggcggcgacgaggaggagcgtcggatcttctacgtcgccgtgagccgggccaagaacgag
ctgacgctgacgtacccgtccacgatcacccgcggcggctacgggccgatgaccttcgcg
acgcccagccgcttcctcacggagctggagccgacgctctacgagcgggcggagctcgat
cgcgagttcctgccgctggaggacgaccggccgcgggggggccgttga
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