Aquisphaera giovannonii: OJF2_13760
Help
Entry
OJF2_13760 CDS
T06184
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
agv
Aquisphaera giovannonii
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agv03019
]
OJF2_13760 (yhaM_1)
Messenger RNA biogenesis [BR:
agv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OJF2_13760 (yhaM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QEH32891
UniProt:
A0A5B9VY95
LinkDB
All DBs
Position
1894107..1895105
Genome browser
AA seq
332 aa
AA seq
DB search
MSRRFVNQLSHGDSIDESYLVADKQLRANRQGNLYLQLELRDKTGSVGARLWNATEELAR
TFEPGDFLRVRGKTQIFQGSLQIILTHVDVLDRNRVEPEDFLPQGSQNVARLMARLREIL
LAMHNPHLRALVECFLIDEEFVRKFTSAPAGIKNHHAYQGGLLEHVVTILDVADRILGLY
PEVDRDLLLTGIFLHDVGKIEELSYDRAFAYTDEGQLVGHLVMGVEILAERVRATRDLTG
EPFPPELLLRLKHMIVSHHGAYEFGSPKLPMTLEAIALHYLDNLDAKLHAFGREIRDDPS
RDSTWTPFQQSIGRRLYKGTPAAATSDLEADS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcttcgtcaatcagctctcgcacggggactcgatcgatgagtcctacctg
gtcgccgacaagcagctccgggccaatcgccagggcaacctgtatctgcagctcgagctc
cgggacaagaccggcagcgtcggcgcccgcctctggaacgccacggaggagctggcgagg
accttcgagcccggcgacttcctccgcgtccgggggaagacccagatcttccagggctcg
ctccagatcatcctgacccacgtcgacgtgctcgatcgcaaccgcgtcgagccggaggac
ttcctcccgcagggctcgcagaacgtcgcccggctgatggcgaggctccgcgagatcctc
ctggcgatgcacaatccccacctcagggcgctcgtcgagtgcttcctgatcgacgaggaa
ttcgtccgcaagttcacgtcggcgcccgcgggcatcaagaaccaccacgcctaccagggg
ggcctcctggagcacgtggtgacgatcctcgacgtcgccgacaggatcctgggcctctac
ccggaggtcgaccgcgacctgctcctgacggggatcttcctgcacgacgtgggcaagatc
gaggagctctcctacgaccgcgcgttcgcgtacaccgacgagggccagctcgtcggccac
ctggtgatgggcgtggagatcctggccgaacgcgtccgggcgacccgggacctcaccggc
gagccgttcccccccgagctgctgctgcggctgaagcacatgatcgtcagccaccacggc
gcgtacgagttcggcagcccgaagctgcccatgacgctcgaggcgatcgcgctccactac
ctggacaacctggacgccaagctccacgccttcggccgcgagatccgggatgacccgagc
cgcgactcgacgtggacccccttccagcagagcatcggccgccgcctgtacaagggcacg
ccggcggccgcgacctcggacctggaagccgactcctga
DBGET
integrated database retrieval system
