Aquisphaera giovannonii: OJF2_13940
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Entry
OJF2_13940 CDS
T06184
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
agv
Aquisphaera giovannonii
Pathway
agv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OJF2_13940 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agv03021
]
OJF2_13940 (sigA_1)
Transcription machinery [BR:
agv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJF2_13940 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
DUF1780
Motif
Other DBs
NCBI-ProteinID:
QEH32909
UniProt:
A0A5B9VXQ8
LinkDB
All DBs
Position
1915542..1916294
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AA seq
250 aa
AA seq
DB search
MYRLGTKTVVDPGRIYGRDMRRHELLSAEEERRLAQAARRGDRAARARLIQANIRLVAKI
AGEFRGRGMDYDDLVCEGNVGLTRAADRFDSDRGCRFATYAKHWITEAIRAALRNTATTI
RLPVHIYGLLAKCRRVERSLFRDRGRMPGLDEVATHLGLSETQVGMVEAARRARRIKLES
GLGDDGGPWSPEEAVDGTGAPESDLERADEREEVLRRMGLLNDRERMVVTLRFGLEGHAP
QTLAEIGRRM
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcctagggacgaagaccgtcgtcgatccaggacgcatctacggccgcgacatg
aggcggcacgaactcctgtccgccgaggaggaacgccggctcgcccaggccgcccgccgc
ggcgaccgggcagcgagggcgcggctgatccaggccaacatccggctggtggccaagatc
gcaggcgagttccgcggccggggcatggactacgatgacctcgtctgcgagggcaacgtc
gggctgacgcgggccgcggaccgcttcgactccgaccggggatgccgtttcgccacctac
gccaagcactggatcacggaagccatccgggccgcgctcaggaacacggcgactacgatt
cgattgcccgtccacatctacggcctgctcgcgaagtgtcggagagtcgagcggtccctc
ttccgcgatcgcggccggatgccgggcctcgacgaggtggccacgcacctcgggctcagc
gagacccaggtaggcatggtggaggcggcgcggcgggcaagacggataaagctcgagagc
ggcctcggcgatgacggcggcccctggtcgcccgaggaagcggtggacggcacaggggcc
cctgaaagcgacctggagcgggccgacgagcgggaagaggtcctgcggcggatgggcctc
ctgaacgaccgggagcgaatggtggtgacgctgaggttcgggctggagggccacgccccg
cagacgctcgcggagatcggccggcggatgtga
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