Aquisphaera giovannonii: OJF2_41280
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Entry
OJF2_41280 CDS
T06184
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agv
Aquisphaera giovannonii
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agv03016
]
OJF2_41280 (truB)
Enzymes [BR:
agv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OJF2_41280 (truB)
Transfer RNA biogenesis [BR:
agv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OJF2_41280 (truB)
Prokaryotic type
OJF2_41280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEH35575
UniProt:
A0A5B9W625
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All DBs
Position
5532099..5532995
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AA seq
298 aa
AA seq
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MGDDRDVKGILNLNKPVGVSSRAIVDRVVRLLPRAKLGHAGTLDPLASGVLVVGVGQGTR
LVESIQAMAKTYRATIRLGGRSDTLDADGTVAWEDDPRIPTSAEVDAALATQVGTILQQP
PAYSALRVGGRRAYDLARAGQAAELAPRPVRIDRVERLPYEWPRLDIEVDCGGGTYIRSI
ARDVGEALGCGGFIEVLRRTRIGPFAIEDALDPDALAAETIGAAMLPLLAAVPHLPAIPL
DDVQLGLVARGRPLDAARLSVRPPSTGEVALVAPDGSLAAIAEVDPAAGAVRPRKVVM
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgggggacgatcgggacgtgaagggcatcttgaacctgaacaagccggtgggcgtcagc
tcgagggcgatcgtcgatcgcgtggtgcggctcctgccgcgggcgaagctgggccacgcg
gggacgctggacccgctcgcctcgggcgtgctagtggtgggggtggggcaggggacccgg
ctggtcgagtcgatccaggcgatggccaagacctaccgggcgacgatccgcctggggggc
cggagcgacacgctggacgccgatggcacggtcgcctgggaagacgacccgcggatcccg
acctcggccgaggtggacgccgccctggcgacccaggtcgggacgatcctccagcagccg
cccgcgtactcggccctccgggtcggcggccggcgtgcctacgacctcgcgagggccggg
caggcggcggagctcgccccgcgcccggtccgcatcgatcgcgtcgagcggctcccctac
gagtggccccggctcgatatcgaggtcgattgcggcggggggacctacatccgctcgatc
gcccgggacgtcggcgaggccctcggctgcggcggcttcatcgaggtcctccgccggacc
cgcatcggcccgttcgccatcgaggacgccctggatccggacgccctggccgcggagacg
atcggggccgcgatgctcccgctcctcgccgccgtcccccacctgccggcgatcccgctg
gacgacgtgcagctcggcctggtcgcgaggggacgccccctcgacgccgcccgcctctcc
gtccgccccccgtcgaccggcgaggtcgcgctcgtcgcgccggacggctcgctcgcggca
atcgccgaggtggaccccgcggccggggcggtccggcctcgaaaggtggtgatgtag
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