Aquisphaera giovannonii: OJF2_47120
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Entry
OJF2_47120 CDS
T06184
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agv
Aquisphaera giovannonii
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agv03032
]
OJF2_47120 (topA)
03400 DNA repair and recombination proteins [BR:
agv03400
]
OJF2_47120 (topA)
Enzymes [BR:
agv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OJF2_47120 (topA)
DNA replication proteins [BR:
agv03032
]
Prokaryotic type
DNA Topoisomerases
OJF2_47120 (topA)
DNA repair and recombination proteins [BR:
agv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OJF2_47120 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
zf_C2H2_13
PNPOx_N
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEH36152
UniProt:
A0A5B9W669
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Position
complement(6286077..6288752)
Genome browser
AA seq
891 aa
AA seq
DB search
MARKSPGASPGDDGGTPKSASPKRASKAAATKAAAPKATKAKAARGKAAAPEDAAPASGG
GRALVIVESPKKAKSINKFLGSKYIVKASMGHVRDLPKRKLGLDVADGYAPSYEVVPAKK
ETVTDLKREAARAGVVYLATDPDREGEAIAWHLQQALELPDDRVRRVTFHEITERAVRDA
FTHVGPINVDMVNAQQARRFLDRFVGYQLSPLLWSKVARNLSAGRVQSVAVRLIADREKE
IRAFVSEEYWKITATVSPAGATAEADRFEAGLVEYEGAKFAANNEADAHKVRDVLASERF
LVSRVDEADKQDRADPPFKTSTLQQQAAIRLRYSGKKTMKIAQELYEGIDVDGSGPVGLI
TYMRTDSLSVSQEAMEAVRGLIHDDFGDKYLPAKPIRYAAGKNAQEAHEAIRPTDLKLAP
DKIKGKLSHDQFRLYQLIYWRFVASQMAPAVFTVTDVAIAAGPGLFKTQGKVLKFDGHKR
VWPPGGKLEDALLPPLKAGQELDLHELAPTQHFTQPPPRYSEATLIKALEKENIGRPSTY
APIIQTIQDRMYVEQKERRFFATDLGMVVTDLLVKHFPKILDLKFTAHMEDELDDIATAK
EDMVKVLDEFYYPFQDALKTAQTQMERVSIPTDEVCHVCGAPMVLKFGRTGQFLGCSKYP
ECKATRPLGGQPRAEAVESGHACPKCHKPLLIRENKRGEKFLSCSGYPECKESFNIDENG
NPVPSRQETEYKCEKCGKPMALRQGRRGPFLGCTGYPKCRNVQDVDAEGKPVQVVDLGIN
CEKCGKPMKVRQGRRGPFLGCTGYPKCRGTAPIPEDKMEQVAAMAPAPAAAAGPDLKTIE
VDETCDDCGGAMTVRRGRRGYFLGCKGYPKCKGTKEPSEATLEKITSVMGA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtggctagaaagtccccaggagcctcgccgggcgacgacggcggcacccccaagtccgcc
tccccgaagcgtgcgagcaaggcggcggcgacgaaggccgcggccccgaaggcgacgaag
gcgaaggcggcccgcggcaaggcggccgcccccgaggacgccgcgccggcgtcgggcggc
ggccgggcgctggtgatcgtggagagccccaagaaggccaagtcgatcaacaagttcctc
ggatcgaagtatatcgtcaaggcgagcatggggcacgtccgcgacctccccaagcggaag
ctcggcctggacgtggccgacggctacgcgccgtcctacgaggtggtgcccgccaagaag
gagaccgtcaccgacctgaagcgcgaggcggcccgggccggcgtggtctacctcgcgacc
gaccccgaccgcgagggcgaggccatcgcctggcacctccagcaggcgctcgagctcccc
gacgaccgggtccgccgcgtgaccttccacgagatcaccgagcgcgccgtccgcgacgcc
ttcacccacgtcgggccgatcaacgtcgacatggtgaacgcccagcaggcccgccggttc
ctggaccggttcgtcggctaccagctcagcccgctgctctggagcaaggtggcccgcaac
ctgagcgccggccgcgtccagtccgtggccgtccgcctgatcgccgaccgcgagaaggag
atccgggccttcgtcagcgaggagtactggaagatcaccgccacggtcagccccgccggg
gcgacggccgaggccgaccgcttcgaggccgggctcgtcgagtacgagggggccaagttc
gcggccaacaacgaggccgacgcccacaaggtccgcgacgtcctcgcctccgagcggttc
ctcgtgtccagggtggacgaggccgacaagcaggaccgcgccgacccgccgttcaagacc
agcaccctccagcagcaggcggccatccgcctccgctactccggcaagaagacgatgaag
atcgcccaggagctgtacgagggcatcgacgtcgacggctccggcccggtcggcctgatc
acctacatgcgtaccgacagcctgagcgtctcccaggaggccatggaggcggtccgcggc
ctgatccacgacgacttcggcgacaagtacctgcccgccaagccgatccgctacgccgcc
ggcaagaacgcccaggaggcccacgaggccatccggccgaccgacctgaagctggcgccc
gacaagatcaagggtaagctctcccacgaccagttccgcctctatcagctcatctactgg
cggttcgtcgccagccagatggccccggccgtcttcacggtgaccgacgtcgccatcgcg
gccggccccggcctgttcaagacccagggcaaggtgctcaagttcgacggccacaagcgg
gtctggccccccggcggcaagctggaggatgcgctgctgcccccgctgaaggcgggccag
gagctggacctccacgagctggcccccacccagcacttcacccagccgcctccgcggtac
agcgaggcgacgctcatcaaggcgctggagaaggagaacatcggccgcccgagcacctac
gccccgatcatccagacgatccaggaccggatgtacgtggagcagaaggagcggcggttc
ttcgcgaccgacctggggatggtggtgaccgacctcctggtcaagcacttccccaagatc
ctggacctgaagttcacggcccacatggaggacgagctcgacgacatcgccacggccaag
gaggacatggtcaaggtcctcgacgagttctactacccgttccaggacgcgctgaagacc
gcccagacccagatggagcgggtgtcgatcccgaccgacgaggtctgccacgtctgcggc
gcgccgatggtgctgaagttcggccgcaccggccagttcctgggctgctccaagtacccc
gagtgcaaggccacgcggccgctcggcgggcagccgcgggccgaggccgtcgagagcggt
cacgcctgcccgaagtgccacaagccgctgctcatccgcgagaacaagcggggcgagaag
ttcctctcctgctccggctacccggagtgcaaggagtcgttcaacatcgacgagaacggc
aaccccgtcccgtcgcggcaggagaccgagtacaagtgcgagaagtgcggcaagccgatg
gccctgcgacagggccgccgcgggccgttcctcggctgcaccgggtatcccaagtgccgc
aacgtccaggacgtggacgccgagggcaagcccgtgcaggtggtggacctgggcatcaac
tgcgagaagtgcggcaagccgatgaaggtccggcagggccgccgcgggccgttcctcggc
tgcaccggctaccccaagtgccgcggcacggcgccgatcccggaggacaagatggagcag
gtcgccgccatggcccccgcgccggccgcggccgccgggcccgacctgaagacgatcgag
gtggacgagacctgcgacgactgcggcggcgccatgaccgtccgccggggccgccgcggc
tacttcctcggctgcaagggctaccccaagtgcaagggcacgaaggagccctcggaggcg
acgctcgagaagatcacgagcgtgatgggggcctga
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