Aquisphaera giovannonii: OJF2_54960
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Entry
OJF2_54960 CDS
T06184
Symbol
sigA_9
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
agv
Aquisphaera giovannonii
Pathway
agv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OJF2_54960 (sigA_9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agv03021
]
OJF2_54960 (sigA_9)
Transcription machinery [BR:
agv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJF2_54960 (sigA_9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
SAM_MT
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QEH36911
UniProt:
A0A5B9WA01
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All DBs
Position
7232501..7233484
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AA seq
327 aa
AA seq
DB search
MASHDLLNYDGPSAAILNRDDVRVLTPEEERALLVELQECKTSLVESWDNPRNPRVGPPS
PVTAEDGEEVQDFVRRVLRADGIVRDEGKELAAIAARYDEIRTKLAMANVRLVAHVVRKY
RNRGVSSSDLLQEGFCGLLKAIDRFEPSKETRLASYAVWWIRQTVQRAVAAGAYPVRLNP
RHLQQLADSNEDLAGKKSGSREASRSGGSQATIRQIHAATRPTISLDATAGAGRDTSLLS
QLAYPMEEDVHDPEMDEYLMAMMNHLKPREQTVLQLRFGLGGRECHSLSQVSVMLDVSKE
RIRQIQETALRKLRGMAEEHACLAVGH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcacgacctcctgaattacgacgggcctagcgccgcaatcctcaatcgcgac
gacgtccgcgtgctgacccccgaggaggagcgggcgctcctggtcgagctccaggagtgc
aagacatcgctcgtcgagtcctgggataacccccggaacccgcgggtcggcccgccttcg
ccggtgaccgcggaggacggcgaggaggtccaggacttcgtccgccgggtactccgggcg
gacggcatcgtccgcgacgagggcaaggagctggccgccatcgcggcacgatacgacgag
atccggaccaagctggcgatggccaacgtccggctggtggcgcacgtcgtccgcaagtac
cgcaatcggggcgtctcgagctccgacctgctccaggagggcttctgcggactactgaag
gcgatcgatcgtttcgagccgtccaaggagacccgactggcgtcgtacgcggtctggtgg
atccggcagacggtgcagcgggcggttgcggcgggcgcgtatccggtccgactcaaccct
cgccatctccagcagcttgccgatagcaacgaggatctcgccgggaagaagtccggcagc
cgggaggcctcccgctccggcgggtcccaggcgaccatccggcagatccatgcggcgacg
cgcccgacgatctcgctcgacgcgaccgcgggcgccggccgggatacgagcctgctctcc
cagctcgcctatcccatggaggaagacgtgcacgaccctgagatggacgagtatctcatg
gcgatgatgaaccacctgaagcctcgcgagcagaccgtgctgcaactgcggttcggcctc
ggggggcgggaatgccactcgctgagccaggtgagcgtcatgctcgacgtgtccaaggag
cggattcgacagatccaggagaccgcccttcgcaagctccggggcatggccgaggagcat
gcctgcctcgcggtcgggcactga
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