Aquisphaera giovannonii: OJF2_62270
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Entry
OJF2_62270 CDS
T06184
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
agv
Aquisphaera giovannonii
Brite
KEGG Orthology (KO) [BR:
agv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agv03016
]
OJF2_62270 (truD)
Enzymes [BR:
agv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OJF2_62270 (truD)
Transfer RNA biogenesis [BR:
agv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OJF2_62270 (truD)
Prokaryotic type
OJF2_62270 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEH37636
UniProt:
A0A5B9WAN5
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All DBs
Position
8220569..8221765
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AA seq
398 aa
AA seq
DB search
MKVKREPEDFRVDERIAVRPAERGRYVLYRLSKRGLGTIEAVDLICRRWNLAGRRVSYGG
LKDRHAVTTQYLSILEGPDRPIREPSFELEPVGRLDVPYGPQHFDGNRFGIVLRDMAEAD
AASAIDALERLPADGLPNYFDDQRFGSVGFSGEFIGHAWLKGDHERALRLALAEPTPFDR
SGVKAQKAVVRRHWRDWAEAKARLDRSSTRSIVTYLVDHPEDFRGAFARLKRELRTLYFS
AFQSHLWNLLLSAWIDRMTRPDQRVPVDLKVATLTFPRGLDEGQREAFRAAAIPLPSART
PEPAGSMGELAREVLTPFQLEWKDLRVRHLKDVFLSKGSRAAIVYPEDVRAATEDDGLHP
GRKALRMGFSLGKGSYATILVKRITGAAGAASPTDGEP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaagcgagagccggaagactttcgggtcgatgagcggatcgccgtgcggccg
gcggagcggggccggtacgtcctctaccgcctctcgaaacgagggctcgggacgatcgag
gcggtggacctcatctgccgccgctggaacctcgccggccgccgcgtcagctacggcggg
ctgaaggaccggcacgcggtgacgacccagtacctcagcatcctcgaggggccggaccgc
ccaatccgcgagccgtcgttcgagctcgagccggtgggccggctggacgtgccctacggg
ccgcagcacttcgacggcaaccggttcggcatcgtcctccgggacatggccgaggcggac
gcggcctcggcgatcgacgcgctcgagcggctgcccgccgacggcctgcccaactacttc
gacgaccagcgcttcggctccgtcgggttctccggcgagttcatcggccacgcctggctc
aagggggaccacgagcgggccctccgcctcgcgctggccgagccgacgccgttcgaccgg
tcgggggtcaaggcccagaaggccgtcgtccgccggcactggcgggactgggccgaggcc
aaggcgcgactcgaccggtcctcgacgcggagcatcgtgacctacctggtggaccacccg
gaggacttccgcggcgcgttcgccaggctcaagcgggagctacggacgctctacttctcc
gccttccagagccacctgtggaacctcctgctctcggcctggatcgaccggatgaccagg
cccgaccagcgggtgccggtggacctgaaggtcgcgacgctcaccttcccccggggactc
gacgagggccagcgggaggccttccgcgccgcggcgatccccctgccgtcggcgcggacg
ccggagccggccgggagcatgggcgagctcgcccgcgaggtcctcacgccgttccagctc
gaatggaaggacctgcgcgtgcggcacctgaaggacgtcttcctgtccaagggctcgcgc
gcggcgatcgtctacccggaggacgtccgggccgcgacggaagacgacggcctgcacccc
gggcggaaggcgctccgcatgggattttcgctgggcaagggttcgtacgcgacgatcctg
gtgaagcggatcaccggcgccgcgggggccgcatcgccgacggacggcgagccgtga
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