KEGG   Archaeon GW2011_AR10: QT03_C0001G0389
Entry
QT03_C0001G0389   CDS       T03835                                 
Name
(GenBank) transcription initiation factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
agw  Archaeon GW2011_AR10
Pathway
agw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:agw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    QT03_C0001G0389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agw03021]
    QT03_C0001G0389
Transcription machinery [BR:agw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     QT03_C0001G0389
 Prokaryotic type
  Archaeal type
    TFB
     QT03_C0001G0389
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 Zn_ribbon_tTFIIB Zn_ribbon_LysW HTH_AsnC-type Zn_ribbon_3 Auto_anti-p27 Trm112p GATA Cas12f1-like_TNB BRF2-like_C_cyclin_rpt DUF7340 Zn_ribbon_Nudix DUF7351 Ribosomal_S27e HTH_Tnp_ISL3 DUF6989 Zn_Ribbon_Prim Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: AJF59890
LinkDB
Position
complement(334622..335527)
AA seq 301 aa
MSEKCPECGSIKLRRDDERGEIVCNQCGLILSDDLVDLGKEWRSFDSDQMEERARTGSPM
KYVKLNKGLVTMIDRRGTDLRGNKLSSKSRAQMYRLIKWHKRASISSSMQRNLSIALTEL
RRVASYLNIPEQLIETAALLYRKTVKKGLIRGRLIEAVVAAVLYTVCRTYNVPRTLNEMA
EASGLTKKEIGRTYRFLVRELKLDVPLTNPVHYIPRFASELNLSGEVQEEGRKILEKAIS
NGLISGRGPTGVAAAAVYIAGLLKGERRTQKEVANVAGVTEVTIRNRYRELRKKLNIEVV
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagtgaaaaatgtcctgaatgcgggagcataaagttgaggagagacgacgaaagagga
gaaatagtgtgcaatcaatgtggccttattctgtctgacgacttagtggatttgggcaag
gagtggaggagctttgactctgaccagatggaggaaagagccagaacaggttctccaatg
aagtatgtcaagctcaacaagggccttgtaacaatgattgacaggcgcggaacagacctt
cgcggcaacaagctttcaagcaaaagcagggcacaaatgtacaggcttatcaagtggcat
aagcgtgcttcaatcagctcttcaatgcagagaaacctttcaattgctttaaccgagctg
agaagggttgcctcttacttgaacattccggagcagttgattgagacagctgcactgctt
tacaggaaaaccgtcaagaaaggcctcattaggggaaggctaattgaagcggttgttgca
gcagtgctctacactgtgtgcagaacatacaatgttcccagaacccttaatgagatggct
gaagcatcaggtttaaccaagaaagaaattgggagaacttacaggttcttggttagggag
ctgaagctggacgtgcctctcacaaaccccgttcattatattccgaggtttgcctccgag
ttgaacctttcaggtgaagtgcaagaggaaggaaggaaaatactcgaaaaagcaatcagc
aatggcctcataagtggaaggggcccaaccggggttgcagctgcagcggtctacattgca
gggctcttgaagggcgagcgcagaacccagaaagaggtcgcaaatgttgcaggcgtaacc
gaggttacaatccgaaacaggtacagggaactgagaaagaagctcaacattgaagtggtt
gcttaa

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