Archaeon GW2011_AR10: QT03_C0001G1175
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Entry
QT03_C0001G1175 CDS
T03835
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
agw
Archaeon GW2011_AR10
Pathway
agw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QT03_C0001G1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agw03019
]
QT03_C0001G1175
03009 Ribosome biogenesis [BR:
agw03009
]
QT03_C0001G1175
Enzymes [BR:
agw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QT03_C0001G1175
Messenger RNA biogenesis [BR:
agw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QT03_C0001G1175
Ribosome biogenesis [BR:
agw03009
]
Prokaryotic type
rRNA helicases
QT03_C0001G1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJF60656
UniProt:
A0A0B5HK75
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All DBs
Position
1064126..1065214
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AA seq
362 aa
AA seq
DB search
MNIKDSIKKALQRKGFFKASEIQEKVIPAALLGKDVVGKSRTGTGKTAAFAIPLVQKIIP
GQGFSAIVIVPTRELASQVKEEIASIASGSHVKTLAVFGGQNIRRQMDFLEREPEIIVGT
PGRLIDLLSRGALSLKRSRFLVLDEADKMFDMGFRDDVERIISVLPRERQTMLFSATMPR
EILGMIDRHMSRNKEIFDLSEDDAPVQEVQQFYLMADRHQKIDSLRKVLVAYKSKTLVFC
RTKRTVDWLERQLSNRGIRALAIHGDKPQNARNRIIDRFKSSSGGVLIATDIVARGIHVD
DIGNVINFDFPQETEAYIHRIGRTARQGKQGMAVSLCSNLMELETLKRVGARNNAVIQPF
QG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaggacagcataaagaaggccctgcaaagaaaggggttctttaaggcttcc
gaaatacaggaaaaagtcattccagcagcactgcttggaaaagacgttgtcgggaaatca
aggactggaacagggaaaacggctgcgtttgccattccgcttgtccagaaaataattccc
ggtcaagggttttctgcaatagtgattgttccaacgagagagcttgcaagccaggttaag
gaagaaattgcttccattgcaagcggaagccacgtgaaaacattggctgttttcggcgga
cagaacatccgcaggcaaatggattttcttgaaagggagccagaaataattgttggcact
cccggaaggctgattgacctcctttctaggggcgcgctttccttgaaacggtcaaggttc
cttgtgctggatgaagccgacaaaatgtttgacatgggtttcagggatgacgtggagaga
ataatctccgtgcttccaagggaaaggcagacaatgcttttttctgcaaccatgccgaga
gaaattcttggaatgattgacaggcacatgtcacgcaataaggagatttttgatttaagc
gaagacgatgccccagtccaagaagtgcagcagttttatttgatggctgacaggcaccag
aagattgattcgctgcgcaaagtcttggttgcatacaaatcaaaaacccttgttttctgc
aggacaaaaagaaccgttgactggcttgaaaggcagctttcaaatagaggaataagggcg
cttgcaattcacggcgacaagccgcaaaacgcaagaaacagaataattgacaggttcaag
agttcaagcggcggagtgcttattgcaacagacattgttgcaaggggcattcacgttgat
gacattgggaacgtaataaactttgatttcccccaggaaacggaagcatacattcacagg
attgggagaactgcaaggcaaggcaaacaaggaatggcagtgagcctttgctctaacctc
atggaacttgaaacccttaaaagggttggcgcaagaaacaatgcagtaatccagcccttt
caaggctaa
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