Archaeon GW2011_AR10: QT03_C0001G1192
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Entry
QT03_C0001G1192 CDS
T03835
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
agw
Archaeon GW2011_AR10
Brite
KEGG Orthology (KO) [BR:
agw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agw03016
]
QT03_C0001G1192
Enzymes [BR:
agw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QT03_C0001G1192
Transfer RNA biogenesis [BR:
agw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QT03_C0001G1192
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AJF60672
UniProt:
A0A0B5HR81
LinkDB
All DBs
Position
complement(1079132..1079674)
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AA seq
180 aa
AA seq
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MQEKTFMNKRVFVAVNIPQEIRKEIVGIFSSKLPKDKMKVVEEENLHITLKFLGYFSPEA
IEKLKENLLKTTQKKFSVELKGIGHFNGRVLWVGVGKGSSELEKLSRELDELLELKNDSF
HSHVTLARNKSLGRKQVSELAEELNRASFIKEFKVKSIDLMESKLTPKGPVYGKLFEKKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaaaactttcatgaacaaacgggtttttgttgcagtcaacattccgcaagaa
atcaggaaagaaattgtcggcattttttcctcaaagctgccgaaagacaaaatgaaggtt
gtggaagaagagaaccttcacatcacactaaagtttcttggctactttagcccggaagca
attgaaaaattgaaagaaaacctactgaaaaccacccaaaaaaagttttcagtggagttg
aagggcattggacacttcaatggaagggttttatgggttggagttggaaaaggaagcagt
gaactggaaaagcttagcagagaattggatgaactgcttgaactgaaaaacgatagtttt
cactcgcacgtaacgcttgcacggaacaaatcgctgggcagaaaacaagtaagcgagcta
gcggaagaactaaacagggccagcttcataaaagaattcaaagtcaaaagcattgactta
atggagtcaaagctgactccaaaagggccagtatacggcaagttgtttgaaaaaaaactt
taa
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