Archaeon GW2011_AR10: QT03_C0001G1273
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Entry
QT03_C0001G1273 CDS
T03835
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
agw
Archaeon GW2011_AR10
Pathway
agw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QT03_C0001G1273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agw03019
]
QT03_C0001G1273
Messenger RNA biogenesis [BR:
agw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QT03_C0001G1273
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
QT03_C0001G1273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
ECR1_N_2
OB_MEIOB_N
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AJF60752
UniProt:
A0A0B5HRH5
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All DBs
Position
1155099..1155878
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AA seq
259 aa
AA seq
DB search
MQKELVFPGSFLSTEEEFLAGANTYIDSSGSIFSDSVGVKEVDEKNREIKVKEKLKEVKM
LERGCTVYGVISNVREQIAMVELKFATKDGYEHRINNSFGILPVFNVSDRYIESLENEFK
IGDIIKANVANVTTFNVELETKSSTDFGVVRKRESFLSADFRNELKVKENMEKERGEIAG
DSREGPRRRDGSSGADRDRGRGRIGSRGRYARNAIGGRERDETSEGRGRGRIGMRDGEGR
SGSWGSRRNPERSSERRWR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaaagaacttgtttttccaggaagctttcttagtactgaagaggagtttttggca
ggcgcgaacacttacattgacagcagcggcagcattttttctgactcggttggagtaaag
gaagttgatgaaaaaaacagggaaataaaggtgaaagagaagctaaaggaagtaaaaatg
cttgagcgcggctgcactgtttacggtgttatttcaaatgtcagagaacagatagcaatg
gtggagttaaagtttgccactaaggacggttacgagcaccgaatcaacaattctttcggc
attctccctgttttcaatgtcagcgaccgctatattgaatccttggagaacgagttcaag
ataggggacataatcaaggcgaacgttgcaaacgtaaccacttttaatgtcgagcttgaa
accaaaagctcaactgacttcggggttgtgagaaagcgggagagctttctttccgctgat
ttcaggaacgagttaaaggtaaaggaaaacatggaaaaagagagaggcgaaattgcagga
gacagcagggaaggcccgaggagaagagatggaagcagtggcgctgatcgagataggggc
agaggaagaattggttcaagagggagatatgcaaggaacgcaattggtggaagagaaaga
gatgaaactagtgaggggagaggcagaggaagaattggaatgagggacggggaaggaaga
agcggaagctggggaagcaggagaaacccagaaaggagtagtgagcggagatggagatag
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