Archaeon GW2011_AR10: QT03_C0001G1357
Help
Entry
QT03_C0001G1357 CDS
T03835
Name
(GenBank) exosome complex RNA-binding protein Rrp4
KO
K03679
exosome complex component RRP4
Organism
agw
Archaeon GW2011_AR10
Pathway
agw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QT03_C0001G1357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agw03019
]
QT03_C0001G1357
Messenger RNA biogenesis [BR:
agw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QT03_C0001G1357
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
QT03_C0001G1357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N_2
KH_6
ECR1_N
RRP40_S1
S1
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
AJF60834
UniProt:
A0A0B5HYI9
LinkDB
All DBs
Position
1226464..1227084
Genome browser
AA seq
206 aa
AA seq
DB search
MRKIVVPGELVTEERKRLGRNVYLRDGKIFSEVIGLAVEDETTASVVALEGRYMPEKGDI
VVGIVVGEKFAGYDIDLKYFYKAFVSKKEFMDSLKNHSVVSARVDKVNEVNEIELSNVRV
FYGGIVIGVSPVKVPRIIGKDSSMLEVLKKGTNSTLVVGKNGLIWAKTDNLALLEKALEK
IQRESHLENLTNRISEFLDKNKKEAK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaatagttgttccaggagagcttgtaactgaggaaagaaagaggcttgggaga
aacgtttaccttcgtgatggcaaaattttctctgaggtaattggattagcagttgaagat
gaaacgactgcttcggttgtggcgcttgaagggcgctacatgcctgaaaaaggtgacatt
gtagtgggaattgttgtaggcgaaaagtttgccggctacgacattgacttgaaatacttt
tacaaggcttttgtttcaaaaaaggagttcatggattccctgaaaaaccattccgttgtt
tcagcgagggttgataaagtgaacgaagtaaacgaaattgagttaagcaatgtaagggtt
ttttatggcggcattgttattggggtttcgcctgttaaagtgccgaggataatcgggaag
gacagctcaatgctggaagtcctaaagaagggcacgaattcaactcttgtggtgggaaag
aatgggttgatttgggctaaaacggataacttggcgctgctcgagaaggcgcttgaaaaa
atccagagggaatcccaccttgaaaacttaaccaacagaatatctgagtttttggataaa
aacaagaaagaggcgaagtga
DBGET
integrated database retrieval system
