Agreia sp. COWG: AGREI_1179
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Entry
AGREI_1179 CDS
T07018
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
agx
Agreia sp. COWG
Pathway
agx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AGREI_1179 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agx03019
]
AGREI_1179 (orn)
03009 Ribosome biogenesis [BR:
agx03009
]
AGREI_1179 (orn)
Messenger RNA biogenesis [BR:
agx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AGREI_1179 (orn)
Ribosome biogenesis [BR:
agx03009
]
Eukaryotic type
Pre-60S particles
RNases
AGREI_1179 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAD5995975
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All DBs
Position
COWG:complement(1150526..1151146)
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AA seq
206 aa
AA seq
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MASLTDRLVWIDCEMTGLDLSVDELVEVAVVITDFDLTILDPGFSIVIKPDDSAMANMND
FVRDMHASSGLDQEIPNGVSLAEAEFQVLEYILKFVPTGQQAPLAGNTIGTDRAFLSKYM
PRVDGHLHYRSVDVSSIKELVHRWFPRVYYNAPKKDGGHRALADILESIRELGYYRKGAF
VAEPGPATDDLKELSNTIVRDFASRL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactcacggatcgtctcgtctggatcgactgcgaaatgacgggactcgacctc
tcggtcgatgagctcgtcgaagtagcggtcgtgatcacggacttcgacctcaccatcctc
gatcccggattctcgatcgtgatcaagcccgatgactcggccatggccaacatgaacgac
ttcgtgcgcgacatgcacgcgtcgagcgggctcgatcaggagattccgaatggagtcagc
ctcgcggaggcagagttccaggtgctcgaatacattctgaagttcgttcccacgggacag
caggcgcccctggccggcaacacgatcggcaccgacagggctttcctgtcgaagtacatg
ccccgcgtcgatggacacctgcactatcgcagcgtcgacgtgtcctccatcaaagaactc
gttcaccgttggttcccccgtgtgtattacaacgccccgaagaaagacggcggacaccgt
gccctcgccgacatcctcgagtcgattcgcgagctcggctactaccgaaagggcgctttc
gtcgccgagcccggcccggccaccgatgatctgaaggagctctccaacacgatcgtgcgc
gacttcgcctcgcgtctgtag
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