Agreia sp. COWG: AGREI_1805
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Entry
AGREI_1805 CDS
T07018
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agx
Agreia sp. COWG
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agx03016
]
AGREI_1805 (truB)
Enzymes [BR:
agx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AGREI_1805 (truB)
Transfer RNA biogenesis [BR:
agx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AGREI_1805 (truB)
Prokaryotic type
AGREI_1805 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAD6000052
LinkDB
All DBs
Position
COWG:complement(1771973..1772959)
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AA seq
328 aa
AA seq
DB search
MPEKFTRDKAEPSTRSGVLFIDKPAGLTSHDVVARTRRIAGTRKVGHAGTLDPMATGLLV
LGVNASTRLLTYVVGLDKEYLATIRLGVATTTDDAEGEVVSVAPSGAVEGLIAADIRSQV
EALTGDIEQTPSSVSAIKVDGQRAYALVRSGVEVKLKARPVTVSEFEVVDERAATTADGA
QVVELEVRVVCSSGTYIRALGRDLGAALGVGGHLTALRRTRIGPFRVDEAADLETVIVAD
ALEAPATTASRLFETLELTAQQSIDLGHGKRLELGDTAPDARGPVAAIAPDGRLVGLVSV
ASGRAQTLVNFPPDQQSGADARSAGGDS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagaagttcacccgtgacaaagccgagccttcgacgcgcagcggcgttctgttc
atcgacaagcccgctggcctcaccagccacgacgtggtcgcccgcacccgccggatcgcc
ggaacccgcaaggtcgggcacgcaggaacgctcgaccccatggcgacggggctgctcgtg
ctcggcgtgaacgcatcgactcggctgctcacctacgtggtgggcctcgacaaggagtac
ctggccaccatccggctcggcgtcgccaccacgacagacgacgccgagggcgaggtcgtc
tccgtggcaccgtctggcgcagtcgaggggctgatcgcggcggacatccggtctcaggtc
gaggcgctcacgggtgacatcgagcagaccccgagttcagtgagcgccatcaaggtcgac
ggtcagcgtgcctatgcgctggtgcgaagcggcgtcgaggtgaagctgaaggcgcggccg
gtcacggtgtccgagttcgaggtcgtcgacgagcgcgccgccaccacggccgacggcgca
caggtggtcgagctcgaggtgcgcgtggtgtgctcgtcgggaacctacattcgagcccta
ggccgtgacctgggtgcggcgctcggggtagggggccacctgaccgccctcaggcgtacc
cgcatcgggccgttccgcgtcgacgaggccgccgatctcgagaccgtgatcgtggccgat
gcgctcgaggcccctgccaccacagcatcacgcctcttcgagaccctcgagctcaccgcc
cagcagagcatcgacctgggccacggcaagaggctcgagctgggcgacaccgcgccggat
gcccggggcccggtcgccgcgatcgctcccgacggccgcctggtcggcctcgtctccgtc
gcttcaggtcgagcgcagacgctggtgaactttccgccggaccagcagtccggggcggac
gcccgttctgccggaggcgactcatga
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