Agreia sp. COWG: AGREI_2012
Help
Entry
AGREI_2012 CDS
T07018
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agx
Agreia sp. COWG
Pathway
agx03420
Nucleotide excision repair
agx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGREI_2012
03430 Mismatch repair
AGREI_2012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_2012
Enzymes [BR:
agx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGREI_2012
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGREI_2012
MMR (mismatch excision repair)
Other MMR factors
AGREI_2012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAD6001594
LinkDB
All DBs
Position
COWG:complement(1993451..1996684)
Genome browser
AA seq
1077 aa
AA seq
DB search
MIGALQLAEALGMPRPTDEQCAVIEAPLVPSLVIAGAGSGKTATMANRVVWLLANGHVRV
TEVLGLTFTRKAAGELGSRINGHIDILRNSGLLPDGAPPQHTLDGAADSSDLFDRPTVST
YNSFGNTIFRDNALLVGREPESVLLGENAAWGLARRVVLAEGDERLIPLRKNLDQLVEAV
LSLSSELSENVVDVAAARSLAHRFGGLADLPYTEGKAKSSPYASVTSAVDAVSALPVLLD
LAGAYARQKQARGLVEFSDQVALALAICSRNPAVVDRYRSRFSVVLLDEYQDTSVVQTRL
LARLFGGHGVMAVGDPHQSIYGWRGASASNLAWFGRDFGSGSDSVPTFSLSTSWRNSRSV
LEVANTLVEPLRRSSAVDVHRLRPRPDAPLGSVEARFLQTRDDEAEVMADWIEAKLRDRG
AHDEPPSAAMLFRVRAHMDFFASALDRRGIPFHILGVGGLLSSPEVVDVTSALRATHDPS
AGSSLLRLLAGGRWRIGVRDLRHLTEVASWLAATDSFHRQVEAEVKQSMRDSVSPDDGTS
IVDALDFVTEQRDGHSQLAGFSDEGLARLRHAGRTLATFRARGNLPLVDFVRFVEQELLL
DVELAANERTAPAQGPRPQAALDAFHDEISSFLAGDDDGTLGSFLGWLDRAEKRDDLSQR
TDEPEKGTVQLLTIHGSKGLEWDVVAVPRLVADEIPAQSKEGRGWLRFGVLPYEFRGDAP
SLPRLTWQDLSSQEVFDAGVKVFQSELAAKHLAEERRLIYVAVTRAKNSLLLTGSFWATQ
TKPRRPSTFLTELQNSSIIEALPEQPDDDENPADSGGLTASWPIDPLGSRRPAVEQAAEL
VQSRIDTPVPLSSGRWQRDLDLLLAERDRRAATAGLAPVPDRIAASRFKDFVTDPQAVAR
ALRRPMPERPFRQTRLGTRFHAWVENRYGTAGSIELVDSLEPDDDSVGDELPLEQSRLAE
LQATFEASPWANRQPLEVEVEIHLVLGARVVVCKIDAVFREGDRYQVVDWKTGRAPVDQN
DLEVKQLQLALYRLAYARWKGIDPHLIDAVFYFVADDAIVAPTELLSEQQLLELWPF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggcgcgctgcagttggccgaggccctgggcatgccgcgaccgaccgacgagcag
tgcgcggtgatcgaggcgcccctcgttccctcgctcgtcatcgccggtgccggaagcggg
aagacggcgaccatggcgaaccgcgtcgtctggctgctggcgaacggacacgtgcgggtc
accgaggttctcggcctcaccttcacccgcaaggccgcgggggaactcggcagtcgcatc
aacgggcacatcgacattctcagaaactcggggctcctgccggacggtgcgcccccacag
cacaccctcgacggggcggccgactccagcgatctgttcgaccgaccgaccgtctcgacc
tacaactccttcggcaacaccatcttccgtgacaatgccctgctcgtcggtcgcgagccc
gagtctgttctgctcggcgagaatgccgcctgggggctcgcgcggcgcgtcgtgctcgca
gagggcgatgagaggctcataccgcttcgtaagaacctcgaccagctggtcgaggccgtg
ctctcgctcagctccgagctgagcgagaacgtcgtcgacgtggcagccgcgcgttcgctc
gctcatcgattcggcggtctggcagatctgccgtacacggagggcaaggccaaatcctcg
ccgtatgcgtcggtgacctccgcggtcgacgccgtgagcgccctgcccgttctgctcgac
ctcgccggggcgtatgcgcggcagaagcaggcgagggggctcgtggagttctccgaccag
gtggcgctcgccttggccatctgctcgcgtaatcccgcggtggtcgatcgctatcgttcc
cgcttctccgtcgttctgctcgacgaataccaagacacttctgtggtgcagacgaggctg
ctcgccagactattcggggggcacggcgtgatggcggtcggcgatccgcatcagtccatc
tacggctggcgtggagcgagcgccagcaacctcgcctggttcggtcgcgacttcggctcg
ggctccgattccgttcccacgttctctctgtcgacgagctggcgaaactcgcgctccgtg
ctcgaggtcgcgaacacccttgtcgagccgctcaggcggtcctccgccgtcgacgtgcac
cgcctgcgccctcggccggatgcgccactcggctccgtcgaggcgcgcttccttcagacg
agagacgacgaggccgaggtgatggccgattggatcgaggcgaagctgcgcgaccgtggt
gcgcacgatgagccccccagcgcggcgatgctctttcgagtacgggcgcacatggacttc
ttcgcctccgcgctcgatcgacgcggtattccgtttcatatcctgggcgtcggaggtctc
ctgagctctccggaggtcgtcgacgtcacgagcgcactccgcgcgactcacgatccgagc
gcgggttcgtccctgttgcgattgctggccggtggcaggtggaggatcggcgtgcgcgac
ctgcgccacctcaccgaggtcgcgtcatggctcgcagcaacggattcctttcaccggcag
gtcgaggccgaggtgaaacagagcatgcgtgattcggtctcgcccgacgacggcacctct
atcgtcgatgctctcgacttcgtgaccgaacagcgagacgggcactcccagctcgccgga
ttctccgacgaaggcctggcgcgattgcggcacgcggggcgaaccctggcgacgttccgc
gcgcgcggaaatctgccgcttgtggacttcgtgcgcttcgtcgagcaggaactgcttctc
gacgtcgaactggccgcgaacgagcgcactgcgccagcccaaggcccacgacctcaggct
gccctcgacgcgttccacgacgagatctcctcgtttctcgcgggtgacgacgacggcacg
ctgggcagcttcctcggctggctcgatcgcgccgagaagcgcgacgacctcagccagcgc
accgacgaacccgagaagggaaccgttcagctcctcaccatccacgggtccaagggactg
gagtgggacgtggtggcggtgcccaggctggtggccgacgagattccggcccagagcaaa
gagggcaggggctggcttcgattcggcgtgttgccctacgaatttcggggggatgcgccg
tcgttgccgcgtctgacgtggcaagatctgtcatcgcaggaggtcttcgacgcgggcgtc
aaggtgttccagtcagaactggccgccaagcacctcgcagaagagaggcgcctcatctac
gtcgcggtcacgcgcgccaagaactcgttgcttctcacgggctcgttctgggccacccag
acgaagccgcgacgaccgtcgacttttctcaccgagttgcagaactcgagcattatcgag
gctcttcccgagcagcccgacgacgacgagaatcccgccgactcgggcgggctcactgca
tcgtggcccatcgacccgctgggctcccgccgaccggcggtcgagcaggctgccgaactg
gtgcagagtcgcatcgataccccggtgcccctctcttccgggcggtggcagcgcgacctc
gacctgctgctcgcggagcgcgaccgccgggccgccacggccggcctggctcccgtgcct
gacaggatcgccgcatcccgattcaaagacttcgtgaccgacccgcaggccgtcgcgcga
gcactacgccgtccgatgccggagcgcccgtttcgacagacccggctgggaacccggttc
catgcctgggtcgagaaccggtacggcacggcgggcagcatcgagctcgtcgactccctc
gagccagatgacgactcggtcggcgacgagctgcccctcgagcagagcaggctggccgaa
ttgcaggccacgttcgaggcctcgccctgggcgaaccggcagcccctcgaggtcgaggtc
gagattcacctggtgctgggcgctcgcgtcgtcgtgtgcaagatcgacgctgtctttcga
gagggagaccgttaccaggtcgtggactggaagaccggccgggccccggtcgaccagaac
gacctcgaggtcaagcagcttcagctggccctctacaggctcgcgtatgcccggtggaag
ggaatcgatccacacctgatcgacgcggtcttctacttcgtggccgacgacgccatcgtg
gctcccacagaactgctctcagagcagcagctgctcgaactctggccgttctga
DBGET
integrated database retrieval system
