Agreia sp. COWG: AGREI_2100
Help
Entry
AGREI_2100 CDS
T07018
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agx
Agreia sp. COWG
Pathway
agx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGREI_2100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agx03019
]
AGREI_2100
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_2100
Enzymes [BR:
agx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGREI_2100
Messenger RNA biogenesis [BR:
agx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AGREI_2100
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGREI_2100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
CAD6002251
LinkDB
All DBs
Position
COWG:2082374..2084512
Genome browser
AA seq
712 aa
AA seq
DB search
MSNSGTAPTSTATDILRSLVGRPDAQFHDGQKEAIDALVDDRSRALVVQRTGWGKSAVYF
IATLLLRQQGAGPTILVSPLLALMRDQVAAAARAGVTAASLNSANTHEWDEIRERLSRNE
IDVLLVSPERLNNPRFREEQLPELVRRTGLLVVDEAHCISDWGHDFRPDYRRLRTLIAEL
PQGVPVLATTATANSRVVADVAEQLSVDTHGTGANAVTTIRGPLARASLRLGVLTLPDSK
ARLGWLLSHLAELEGSGIIYALTVSAAEDTARLLRDAGHAVLAYTGRTDPADRETAEALL
KNNEVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRATDNADVLLLPGR
EDAEIWHYFATASMPNESRARAVIDALGAASGPLSTPALEALVDLKRTPLELLLKVLDVD
GAVSKVQGGWVATGRPWVYDAERYERIAAERVAEQQSMLDYVSTSGCRMEFLQRALDDPT
AAPCGRCDRCTSAWYSETVAADDATVAASALQRVGAEIEPRTQWPTGAGSRGVNVKGRIA
AEERVASGRALARLTDLGWGGTLRELFAPRAADAPTSAALIAACAKVLGEWPWAERPAAI
VSMPSRRRPLLIDSVARGLSELGRLPHLGSLDLVGGGPDDAPGGNSVYRLSSVWQRFEVG
SALRDDLDSLAGRPVLLVDDLVDSRWTMTVAGRELRRAGAGTVLPFALALQM
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactccggcaccgcccccacctcgaccgccaccgacatcttgcgctccctggtc
ggtcggccggatgcccagttccacgatggccagaaagaggccatcgacgccctcgtcgac
gaccgcagccgtgccctcgtcgttcaacgcaccgggtggggcaagtcggcggtgtacttc
atcgccacgctactgctcaggcagcagggggcgggccccaccattctggtctcgcccctt
ctcgcgctgatgcgcgaccaggtcgccgcggcggcccgcgcgggcgtcaccgccgccagc
ctcaactcggcgaatacccacgagtgggacgagattcgagaaaggctctcccgcaacgag
atcgatgtgctcctcgtctcgccggaacgactcaacaacccgcgctttcgcgaagagcag
cttcccgaactcgtgcgccgcaccggcctgctggtggtcgacgaggcccactgcatctcc
gactggggtcacgactttcgccccgactaccgaaggttgcgcacgctcatcgccgagttg
ccacagggcgtgcccgtgctggcgaccaccgccaccgcgaactcccgcgtggtcgccgac
gtcgccgagcagttgagcgtcgacacgcacggcaccggggcgaacgccgtcaccaccatc
cggggtcccctcgcccgcgcatcgctccgattgggcgtgctcaccctgcccgactcgaag
gcccgcctcggctggctcctcagccacctggccgagctcgagggcagcggcatcatctat
gcgctcaccgtctccgcagccgaagacacggcgcggttgctccgcgacgccggccacgcc
gtgctcgcctacaccggccgcaccgacccggccgacagggagacggccgaggcgctgttg
aagaacaacgaggtcaaagcgctcgtcgcgacgagcgctctcggcatgggcttcgacaag
cccgacctcggattcgtcatccacctcggcgcgccctcgtcacccgtggcctactaccaa
caggtcggccgcgccggccgcgccaccgacaacgctgatgtgctgttgcttcccggccgc
gaagacgccgagatctggcactacttcgcgactgcatcgatgcccaacgagtcgcgggcg
cgcgccgtgatcgacgccctcggcgccgcatccggccccctctcgacgcccgcgctcgag
gcgctcgtcgatctcaaacgaacaccgctcgagctgctgctcaaggtgctcgatgtggac
ggcgccgtgtcgaaggttcagggcgggtgggtcgcgacgggccgaccgtgggtctacgac
gccgagcgctatgaacgcatcgcggccgaacgtgtggccgaacagcagtcgatgctcgac
tacgtgtcgacctcgggctgccgcatggagtttctgcagcgggccctcgacgacccgacc
gccgcaccgtgcgggcgctgcgaccggtgcacgagcgcctggtactccgagaccgtcgcc
gcagacgacgcgacggtcgcagcgagcgccctgcagcgcgtcggcgccgagatcgaaccc
cgtacccaatggccgaccggggccggcagccggggcgtgaatgtgaagggccgtatcgct
gcagaagagcgcgtcgcatccggccgcgcactggcccgcctcaccgacctgggctgggga
ggaaccctgcgcgaactcttcgcaccgcgagccgcggacgcgcccaccagcgccgcactc
atcgctgcctgcgccaaggttctgggcgagtggccgtgggccgaacgcccggccgccatc
gtgagcatgccgtcaaggcgaaggccgctgctgatcgactcggtggcgcgagggctgtcc
gagctcggaagactgccgcacctgggctcactcgaccttgtcggaggcggtcccgatgac
gctcccggaggcaacagcgtctaccgcctgtcctccgtctggcagcggttcgaggtgggc
tccgcgctgcgcgacgacctcgactccctcgcaggccggcccgtgctgctcgtcgacgac
ctcgtcgatagccgctggactatgacggtcgcgggtcgcgagctgcgtcgtgccggtgcc
ggcacggtgcttcccttcgcgctggcgctgcagatgtag
DBGET
integrated database retrieval system
