Agreia sp. COWG: AGREI_2293
Help
Entry
AGREI_2293 CDS
T07018
Symbol
groEL
Name
(GenBank) chaperonin large subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agx
Agreia sp. COWG
Pathway
agx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGREI_2293 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agx03019
]
AGREI_2293 (groEL)
03110 Chaperones and folding catalysts [BR:
agx03110
]
AGREI_2293 (groEL)
03029 Mitochondrial biogenesis [BR:
agx03029
]
AGREI_2293 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agx04147
]
AGREI_2293 (groEL)
Enzymes [BR:
agx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AGREI_2293 (groEL)
Messenger RNA biogenesis [BR:
agx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AGREI_2293 (groEL)
Chaperones and folding catalysts [BR:
agx03110
]
Heat shock proteins
HSP60 / Chaperonin
AGREI_2293 (groEL)
Mitochondrial biogenesis [BR:
agx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AGREI_2293 (groEL)
Exosome [BR:
agx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AGREI_2293 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AGREI_2293 (groEL)
Exosomal proteins of breast cancer cells
AGREI_2293 (groEL)
Exosomal proteins of colorectal cancer cells
AGREI_2293 (groEL)
Exosomal proteins of bladder cancer cells
AGREI_2293 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAD6003591
LinkDB
All DBs
Position
COWG:complement(2284211..2285830)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPITLKRGIE
KAVAAVTAELIANAKEIETKEEIAATASISAGDPEIGALIAEAIDKVGKEGVVTVEESNT
FGTELELTEGMRFDKGYLSQYFVTDPDRQEAVFEDPYILIVNSKVSNIKDLLPIVDKVIQ
SGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAQLQDIAILTGGQVIS
EEVGLKLENVTLDLLGKARKVVITKDETTIVEGAGDADAIAGRVQQIRNEIENTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKTAFEKLQLTGDEATGANIVKVAIDAPLKQIAQNAGLEPGVVAEKVRNLPVGHGLNAAT
GEYVDMLAAGINDPVKVTRSALVNAASIAGLFLTTSVVVADKPEKVAAPAGDPTGGMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgcttttgatgaagaggcccgtcgcggcctcgagcgtggactgaac
attctggccgacgccgtcaaggtcacgctcggcccgcgtggtcgcaacgtcgtcctcgag
aagaagtggggcgctcccaccatcacgaacgacggtgtgtcgatcgccaaggagatcgag
ctcgacgacccgtacgagaagatcggtgcggaactcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggagacggaacgaccacggcaaccgtgctcgcccaggcgctcgtccgc
gaaggactgcgcaacgtcgcggccggcgccgaccccatcaccctgaagcgcggcatcgag
aaggccgtcgcagctgtgaccgccgagctcatcgccaacgcgaaagagatcgagacgaag
gaagagatcgccgcgaccgcgtccatctctgccggagaccccgagatcggcgcgctgatc
gccgaggcgatcgacaaggtcggtaaagagggcgtcgtcaccgtcgaggagtcgaacact
ttcggcaccgagctcgagctcaccgagggaatgcgcttcgacaagggttacctgtcgcag
tacttcgtgaccgaccccgaccgccaggaagcggtcttcgaagacccctacatcctgatc
gtcaacagcaaggtctcgaacatcaaggacctgctgccgatcgtcgacaaggtcatccag
agcggcaagcagctgctcatcatcgcggaggacgtcgatggcgaggccctggccacgctc
gtcgtgaacaagatccgtggcatcttcaagtcggtcgccgtcaaggctcccggcttcgga
gaccgtcgcaaggctcagctgcaggacatcgccatcctcacgggtggacaggtcatctcg
gaagaggtcggcctgaagctcgagaacgtgacgctcgacctgctgggcaaggcccgcaag
gtcgtcatcacgaaggacgagaccaccatcgtcgagggtgccggcgacgccgacgccatc
gccggtcgcgtgcagcagattcgcaacgagatcgagaacaccgacagcgactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggagttgccgtcatcaaggccggc
gccgcaacggaggttgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggctgctgtcgaagagggcatcgtcgccggtggtggcgtcgccctcatccaggcg
ggcaagaccgctttcgagaagctgcagctcacgggtgacgaggccaccggagcgaacatc
gtgaaggttgcgatcgacgccccgctgaagcagatcgcccagaacgcaggcctcgagccc
ggcgttgtggccgagaaggttcgcaacctgcccgtcggacacggcctcaacgccgcgacc
ggcgagtacgtcgacatgctggccgccggcatcaacgacccggtgaaggtcacgcgctcg
gcgctggtcaacgccgcgtcgatcgccggtctgttcctcaccacctcggtggtcgtcgca
gacaagcccgagaaggtcgcggccccggccggcgacccaacgggtggcatggacttctaa
DBGET
integrated database retrieval system
