Agreia sp. COWG: AGREI_2403
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Entry
AGREI_2403 CDS
T07018
Symbol
rpoA
Name
(GenBank) RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agx
Agreia sp. COWG
Pathway
agx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AGREI_2403 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agx03021
]
AGREI_2403 (rpoA)
03400 DNA repair and recombination proteins [BR:
agx03400
]
AGREI_2403 (rpoA)
Enzymes [BR:
agx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AGREI_2403 (rpoA)
Transcription machinery [BR:
agx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AGREI_2403 (rpoA)
DNA repair and recombination proteins [BR:
agx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AGREI_2403 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CAD6004377
LinkDB
All DBs
Position
COWG:complement(2390017..2391006)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRLDGVL
HEFSTIPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKQATGQVTAADISAPAGVEIHN
PELVIATLNEKAKFELELIIERGRGYVSATQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKNAITPRDAIASAGRTLTELFGLARELNTAAEGIEIGPAPVD
AVLSSELSVPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDTVPGFDGAHFYGGYDDENI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgccccacgctcaccgaagaaaacatctccgaattccgctcgcgg
ttcgtcatcgagccgctggagcccggtttcgggtacacgctcggtaactcgctgcgtcgc
accctgctgtcgtcgatccctggagcggccgtcacgagcatccgtctcgacggcgttctg
cacgagttctcgacgatccccggtgtgaaggaagacgtcaccgagatcatcctgaacatc
aagggactggtcgtctcgagcgagcacgacgagccgatcacggcctacctgcgcaagcag
gccaccggccaggtgaccgcggccgacatctccgcgcccgccggtgtcgagatccacaac
cccgagctcgtcatcgcgacgctcaacgagaaagccaagttcgagctcgagctcatcatc
gagcgcggccgtgggtacgtgtccgccacccagaaccgtagcgagttctcggaggccggc
cagattccggtcgactcgatctactcgcccgtgctcaaggtgacctaccgcgtcgaggcg
actcgtgccggtgagcgcaccgacttcgaccgcctcgtcgtcgacgtcgagaccaagaac
gcgatcaccccccgtgacgccatcgcctccgccggtcgcacgctgaccgagctgttcggc
ctggcccgcgagctcaacacggccgccgagggcatcgagatcggccccgcgccggtcgac
gccgtcctctcgagcgagctctcggttccgatcgaagacctcgacctttccgtgcgctcg
tacaactgcctcaagcgcgagggaatcaacacggtgagcgaactggtcgccctgagtgag
acccagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcaaggacaag
ctcgtcgagcttggcctgtcgctgaaggacacggttcccggcttcgacggcgcccacttc
tacggcggctacgacgacgagaacatctag
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